Komagataeibacter rhaeticus: GWK63_12290
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Entry
GWK63_12290 CDS
T06497
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
kre
Komagataeibacter rhaeticus
Brite
KEGG Orthology (KO) [BR:
kre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kre03019
]
GWK63_12290 (hrpB)
Enzymes [BR:
kre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GWK63_12290 (hrpB)
Messenger RNA biogenesis [BR:
kre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GWK63_12290 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
HA2_N
AAA_22
ResIII
CON_HrpB
Flavi_DEAD
AAA_30
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QIP36155
UniProt:
A0A858JGI5
LinkDB
All DBs
Position
2694950..2697490
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AA seq
846 aa
AA seq
DB search
MQNRLDDLMADAGGALPVAAALPALRTALERTSNAVLVAPPGAGKTTLVPLALLAAPWRG
DGRIIMLEPRRLATRAAAQRMAELLGEPLGGLVGYRTRLDGATSERTRIEVITEGLLVRR
LLSDPMLEGVACVIFDEIHERSVDADAALAFCLDLQRSLRPELKLLAMSATMDGAALSRC
MDAELVESEGRMFPVAIRHATRDLVHRRDLPEAMATAIRTAIAQEEGDVLAFLPGVGEIQ
RTRALLAGIDADVLPLYGELPPAEQDLALTPHPGGRRRVILSTSIAETSLTVPGVRIVVD
GGFRRVPRLDVGTGLTRLDTIRISRAAASQRAGRAGRVAPGTAIRLWTEMTTRAMPPHDQ
PEMMEAELTGLRLDTAAWQEAMGTDPADLPFPDPPPNGAFEAGRSLLQALGALDDDARIT
PEGTRMATLGAHPRLAAMMLAARTAPERALACDIAALLEERDPLRPRRPAGGSRGAPPAA
PADIRLRLDLLAGGDHPDADRAALSRIRHAARQYRRRLGGARDIAASGDPAALIAAAFPD
RVAQSRGDVGSFRLAGGGSARLSKTDELARASLLAVAGMHVRKAAEICLAAPLDRDSLPP
ALLARAREQVETTLDPTTGSVLARRRLRLGTLVLRDRTVTASADEVCALLCQQAAQNLAA
SLTWSDACRQLQARVELARTRLERPDLPDLSDTALAATVGTWLAPWLAGVNRLSALAEMD
LLAMLRATMDHASLKWLDHMLPTHLDLPGGRAGIDYLQPVPVAAARAQTFYGMTDTPRLA
GGTVDLRIALLSPAGRPQAITADLAGFWAGSWADMRRDMRGRYPRHDWPENPATASPPPP
RPPRRS
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaccgacttgatgacctgatggcggacgcaggcggcgcgctgcccgtcgccgcc
gccctgcccgcattgcgcaccgcgctggaacggacgtccaatgccgttctggtcgctccg
cccggcgccggcaagaccacgctggtgccgctggccctgctggctgccccatggcgcggc
gacgggcggatcatcatgctcgaaccccgcaggctggccacacgcgcggccgcccagcgc
atggcggaactgctgggcgaaccgctgggcgggctggtgggctaccgcacccggctggat
ggcgcgacatcggagcgcacgcgcatcgaggtgataaccgagggcctgctggtgcgccgc
ctgctgtccgatcccatgctggagggcgtggcgtgcgtcatattcgatgaaatccacgag
cgttcggtcgatgcggatgcagcccttgccttctgccttgacctccagcgcagcctgcgg
cccgaactgaagctgctggccatgtccgccaccatggacggcgcggccctgtcgcgctgc
atggacgccgaactggtggaaagcgaaggccggatgttccccgtggcgatccgccacgcc
acccgcgaccttgtccaccgtcgtgacctgcccgaggccatggccaccgccatccgcaca
gccattgcacaggaagaaggtgacgtgctggccttcctgcccggcgtgggcgagatccag
cgcacccgcgccctgctggccggaatcgatgccgatgtgctgccgctttatggcgaactg
ccccctgccgagcaggatctggccctgaccccccaccccggcggtcgcaggcgggtaatc
ctgtccacctccatagccgagacatcgctgaccgtgcccggcgtgcgcattgtggtcgat
ggcggcttccgccgcgtgccccggctggatgtgggcacggggctgacgcggctcgacacg
atacgcatctcccgcgcggcggccagccagcgcgcgggccgtgcggggcgtgtggcgccg
ggcacggccatccgcctgtggacggaaatgaccacccgcgccatgccgccccatgaccag
cccgaaatgatggaggccgaactgaccggcctgcggctggatacggccgcctggcaggaa
gcgatgggcacggaccccgccgaccttcccttccccgacccgccccccaatggcgcgttc
gaggccgggcgcagcctgctccaggcccttggcgcgctggatgatgatgcccgcattacg
cctgagggcacacgcatggccaccctgggcgctcatccgcgccttgccgccatgatgctg
gccgcccgcaccgccccggagcgcgcgctggcctgtgacatcgcggccctgctggaagaa
cgcgacccgctgcgcccccgccgccccgccggtggcagccggggcgcgccacccgcagcg
cctgccgatatccgcctgcgcctggacctgctggccggtggcgaccacccggatgccgat
cgcgcggcactttcgcgcatccgccatgccgcccggcagtaccgcaggcggctggggggc
gcgcgtgacattgcggccagtggcgatcccgccgccctgattgccgcggccttccccgac
cgggtggcccagtcacgcggcgatgtcgggtcattccgcctggcgggtggtggcagcgca
cggctttcaaaaaccgatgaactggcccgcgcatccctgctggccgtggccggcatgcat
gtgcgcaaggccgccgagatctgccttgccgccccgctggaccgtgacagcctgcccccc
gccctgctggcccgcgcgcgcgaacaggtggaaaccacgctcgatcccaccaccggcagc
gtgctggcccggcgccggctacggctgggtaccctggtgctgcgcgaccgcacggtcacc
gccagcgccgatgaggtctgcgcgcttttgtgccagcaggcggcccagaaccttgcggcc
agcctgacatggagcgatgcctgccgccagttgcaggcgcgcgtggaactggcccgcacc
cggctggaacgcccggacctgcccgacctgtccgacaccgcgctggcggccacggtcggg
acatggcttgcaccgtggcttgcaggcgtgaaccggctttctgccctggcggagatggac
ctgctggccatgctgcgcgccaccatggaccatgccagcctgaaatggctggaccacatg
ctgcccacccatctggacctgcccggtggccgggcgggcatcgactacctccagcccgtg
ccggtagcggccgcccgtgcgcagaccttctatggtatgacggacaccccccgccttgcc
ggtggcacggtggacctgcgcatcgccctgctttcccccgcagggcgcccgcaggcgatc
accgccgacctggccgggttctgggccgggtcctgggcggacatgcgccgcgacatgcgc
ggccgctacccccgccacgactggccggaaaaccctgcgacggccagcccgcccccgcca
cggccaccgcgccggtcataa
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