Kocuria rhizophila: KRH_01640
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Entry
KRH_01640 CDS
T00701
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
krh
Kocuria rhizophila
Pathway
krh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KRH_01640 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
krh03400
]
KRH_01640 (xthA)
Enzymes [BR:
krh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
KRH_01640 (xthA)
DNA repair and recombination proteins [BR:
krh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KRH_01640 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
BAG28511
UniProt:
B2GKM0
LinkDB
All DBs
Position
complement(181247..182053)
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AA seq
268 aa
AA seq
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MRIATWNVNSIRARADRIEAWLDRSDVDVLAIQETKAKDENFPWELFEFAGYEVAHFGVN
QWNGVAIASRVGLTDVQRTFPDQPTFGKPGQEPAQEARAIGATCGGVRVWSLYVPNGRGL
DDPHMPYKLEWLRVLEGHAKQWLQEDPDAQIALVGDWNVAPQDDDVWDIQLFKEGGYTHV
SEPERAAFHAFIEDAGYQDVVRPRHPGPGVYTYWDYKQLRFPKKEGMRIDFQLCSPALAA
RVQDAWIDRDERKGKGASDHAPVVIEID
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcgccacgtggaacgtgaactccatccgcgcccgcgccgaccgcatcgaggcg
tggctcgaccgctccgacgtggacgtgctggccatccaggagaccaaggccaaggacgag
aacttcccgtgggagctgttcgagttcgcgggctacgaggtggcccacttcggcgtgaac
cagtggaacggcgtggcgatcgcctcccgcgtggggctcacggacgtgcagcgcaccttc
ccggaccagcccacgttcggcaagcccggccaggagccggcgcaggaggcccgcgcgatc
ggcgccacgtgcggcggtgtgcgcgtgtggtccctctacgtgcccaacggccgcggcctg
gacgacccccacatgccgtacaagctcgagtggctgcgcgtgctggagggccatgccaag
cagtggctgcaggaggacccggacgcgcagatcgccctggtgggcgactggaacgtggcc
ccgcaggacgacgacgtgtgggacatccagctcttcaaggagggcggctacacccacgtc
agcgaacccgagcgcgcggcattccacgcgttcatcgaggacgccggctaccaggacgtc
gtgcgcccgcgccaccccggccccggcgtctacacctactgggactacaagcagctgcgc
ttccccaagaaggagggcatgcgcatcgacttccagctgtgctcccccgcactggccgcg
cgcgtgcaggacgcctggatcgaccgcgacgagcgcaagggcaagggcgcctcggaccac
gcgcccgtcgtgatcgagatcgactga
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