Kocuria rhizophila: KRH_02830
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Entry
KRH_02830 CDS
T00701
Symbol
dnaX
Name
(GenBank) DNA polymerase III gamma/tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
krh
Kocuria rhizophila
Pathway
krh03030
DNA replication
krh03430
Mismatch repair
krh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KRH_02830 (dnaX)
03430 Mismatch repair
KRH_02830 (dnaX)
03440 Homologous recombination
KRH_02830 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
krh03032
]
KRH_02830 (dnaX)
03400 DNA repair and recombination proteins [BR:
krh03400
]
KRH_02830 (dnaX)
Enzymes [BR:
krh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KRH_02830 (dnaX)
DNA replication proteins [BR:
krh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KRH_02830 (dnaX)
DNA repair and recombination proteins [BR:
krh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KRH_02830 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_30
Rad17
AAA_14
AAA_19
AAA_18
Mg_chelatase
AAA_5
AAA_28
AAA_16
zf-CXXC
ORC-CDC6-like
nSTAND3
AAA_2
Motif
Other DBs
NCBI-ProteinID:
BAG28630
UniProt:
B2GFF0
LinkDB
All DBs
Position
complement(313355..317149)
Genome browser
AA seq
1264 aa
AA seq
DB search
MTTALYRRYRPETFEDVIGQEHVTEPLMTALRKNRVNHAYLFSGPRGCGKTTSARILARC
LNCAEGPTATPCGRCESCRDLARDGAGSLDVIEMDAASHGGVDHARDLRERATFAPVRDR
YKIFIIDEAHMVTREGFNALLKIVEEPPEHVKFIFATTEPSKVLTTIRSRTHHYPFRLVP
PEPLMRYLEQLCQEEGVSTEPGVLSLVVRAGGGSVRDSLSVLDQLMAGSDERGISYDLAV
ALLGYTHAALLDDVVDAFAAGDAATVFSSVDRVVQTGQDPRRFVEDLLERFRDLVVVNAV
PDSAANILHGMPTDQINRLRNQATQLGAAELSRSADITNEALNEMTGATSPQLHLELLCA
RILLPSADDTTRGITSRVDRLERRLSIPRGAGIRPGGPSIPPAPGAADGVDPAAPHAPGA
DAMAPVAPDSPSSDASAAPAREAADPAPSGPVRQDGSQPGRSALTTPDIAEPSIPEDEAE
NPRGSDHPAAGDPVPQGERGPQGNHPPADGTTTEHDAAGQERSPATGAPADPTKSPASST
PSRPDDAQDTVGAQSRSGVQRLDDTRGGADAHRPDGRESAPRSDGQCSRGRDYDARGSDA
PSHATAPGEDRAATPGEETGASSGARGEPDTAPSDDRDPAAPSPSTGSAGEGAGDGVNDG
AAAGTTAASDVTSGELELLRSSWPEIVSALAEIRRVAWAITVRGTPISYENSTLRIAFEG
DGDIMNFPRFEGDVRTAIQNVVGLDCAVEAVRPGDTRGQHGGPAGGPPPGSGGDPRGGGS
GGRGPAPRSTGGPGSSQEQPDYFREPEGFGVNRRRSNPSGGQDSASPASRDASTAPARDA
SSGPSRSDRGQDRRAGRSEERGRSASQETHREPSGDDDEPVTSWSVAPIPQPGVGTRTGG
DRSGTGEHSAEESGTSTGARASASESAAAPSGEAAGTDSTTAPRSGTGPGSGFSTGRGPE
SDTALGSGQATEPGSGQATAPGSAQGPESPSQAPTEHQAPQDAVQGGPSERPDASPPAPG
ENTPADGSRPHSGGAQNPGGGTPGSGAPSSGIQGRGGQHRGEQSTENQSTGDQNHRDQGM
GGVTPGGAGARPDRGPEYWSPEEPPPPPEDEPPADMYDEPGPAASSYPRRGRRPEGRGDG
SGPVRDGDRPDPHRTPGGGGGAGERTASGRESASPSAHGGATPSPAGGQRRGWRERHAAA
IAAATSGSPGIAPPSTRSPGVDEENFVPGADDESLEDSALYGKAAIERILGGMLIDERSH
DTGR
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
gtgactaccgccctgtaccgccgctaccgcccggagaccttcgaggacgtcatcggtcag
gagcacgtgaccgagcccctgatgaccgcgctgcgcaagaacagggtcaaccacgcctac
ctcttctcgggcccccgcggctgcggcaagaccacgtccgcgcgcatcctggcccgttgc
ctcaactgcgccgaggggcccaccgccacgccgtgcgggcgctgcgagtcctgccgggac
ctcgcccgggacggcgccggctccctggacgtcatcgagatggacgccgcctcccacggc
ggcgtggaccacgcgcgtgacctgcgcgaacgcgccaccttcgcgcccgtgcgggaccgc
tacaagatcttcatcatcgacgaggcccacatggtcacgcgcgagggcttcaacgccctg
ctgaagatcgtggaggaacctccggagcacgtgaagttcatcttcgccaccaccgagccc
tccaaggtgctcaccaccatccgctcacgcacacaccactaccccttccggctggtgccg
cccgagccgctcatgcgctacctggagcagctgtgccaggaggagggcgtcagcaccgag
ccgggtgtgctctccctggtggtccgcgccggcggcgggtccgtgcgcgactcgctctcg
gtgctggaccagctcatggcgggctcggacgagcgcgggatcagctacgacctcgccgtc
gccctgctcggctacacccacgccgcgctgctcgacgacgtcgtggatgccttcgccgcc
ggggacgccgccaccgtgttctcctccgtggaccgcgtggtccagaccggtcaggacccg
cgccgtttcgtggaggacctcctcgagcgcttccgggacctcgtggtggtcaacgcggtc
ccggactccgcggccaacatcctgcacgggatgcccacggaccagatcaaccggctgcgc
aaccaggccacccagctgggcgccgcggagctctcccgctccgcggacatcaccaacgag
gcgctcaacgagatgacgggagccacctccccgcagctgcacctggagctgctgtgcgcc
cgcatcctgctgccctccgcggatgacaccacccgcggcatcacctcccgcgtggaccgc
ctggaacgccggctgagcattccccggggcgcgggcatccggcccggtgggccctccatt
cctccggcgcccggcgcggcggacggggtcgacccggccgcgccccacgcacccggtgcg
gacgccatggcgcccgtggcgcccgactccccttcgtccgacgcctccgcggcacccgca
cgggaggccgcggaccctgccccgtccggccccgtccggcaggacggctcgcagccgggc
cgttccgccctgaccaccccggacatcgccgagccgtccatcccggaggacgaggccgag
aacccccgcggcagcgaccaccccgccgcgggtgaccccgttccgcagggtgagcgcgga
ccccagggcaaccacccgcccgcggacggcaccaccaccgagcacgacgccgcggggcag
gagcgctccccggccaccggtgcacccgccgacccgacgaagtcgccagcgtcttcgacg
ccctcccggcccgacgacgcccaggacaccgtcggggcgcagtcacgttccggcgtccag
cgcttggatgacacgcgcggtggtgcggacgcgcacagaccggacggccgggagtccgcg
ccgcgctccgacggacagtgttctcgtgggcgcgattacgacgcccggggttcggacgcc
ccgtcccacgccaccgcccccggagaggaccgcgccgccacccccggcgaggagaccggg
gcatcctccggcgcccgcggcgaaccggacaccgcaccgtcggacgaccgggaccccgcc
gcgccgtcgccctccactggaagcgctggagagggcgcgggagacggtgtgaacgacggt
gccgcggccggtaccaccgcggcgagcgacgtcaccagcggcgagctggagctgctgcgc
tcctcgtggccggagatcgtctccgccctcgcggagatccgccgcgtggcgtgggccatc
acggtgcgcggcacgcccatctcctacgagaactccacgctgcgcattgccttcgagggt
gacggcgacatcatgaacttcccccgcttcgagggggacgtccgcaccgccatccagaac
gtggtggggctggactgcgcggtggaggccgtgcgcccgggggacacgcgaggacagcac
ggcggccccgccggaggcccacccccgggctcgggcggagacccgcgcggcggcggttcc
ggtgggcgcggcccggcccccaggagcaccggtggcccgggttcatcccaggagcagccg
gactacttccgggagccggagggcttcggcgtgaaccgacggcgcagcaacccctcgggt
ggccaggacagcgcgtcccccgcgtcgagggacgcgtcgaccgcccccgcgcgggatgcc
tcctcggggccctcgcggagcgaccgggggcaggatcggcgggcgggccggtcggaggag
cgcggccgctccgcatcgcaggaaactcaccgagagccgtccggcgacgacgacgaaccc
gtcacctcgtggtccgtggcgcccattccccagccgggggtcggcacccgaacgggtggt
gaccggtccggcaccggggagcactctgcggaagagagcggcacctccacgggcgcgcgg
gccagtgcctcggaatccgctgccgcgccgtccggggaggccgccggaaccgacagcacc
actgcaccacgctccggtacggggcccggctcgggattcagcacggggcgcgggccggag
tccgacaccgcgctcgggtcggggcaggccactgagcccgggtcggggcaggccaccgcg
cccggctccgcccagggtcccgagtccccgagtcaggcgcccacggagcaccaggcaccg
caggacgcagtgcagggcgggccgtccgagcgccccgacgcatctcccccggcacccggt
gagaacacccccgcggacggcagccgtccgcactccggtggagcccagaacccgggcggc
gggaccccgggcagtggggccccaagcagcgggatccagggccgggggggccaacaccgt
ggggagcagagcaccgagaaccagagcaccggggaccagaaccaccgggaccagggcatg
ggcggcgtcaccccgggtggtgcgggcgcccgaccggaccggggccccgagtactggagc
cctgaggagccgccccctcccccggaggacgagcccccggcggacatgtacgacgaaccg
gggcccgcggcgtcgtcgtacccgcggcgtggacgccgccccgagggtcggggcgacggc
tcggggcccgtgcgggacggggaccgcccggatccgcaccgcacccccgggggcgggggc
ggcgccggggagcgcaccgcgtccggccgggagtccgcgagcccctcggcacacggcggg
gccaccccctcgcccgccggaggacagcggcgcggctggcgggagcgccacgccgctgcc
attgccgcggccaccagcggttccccgggcatcgccccgccgagcacccgcagcccgggc
gtggacgaggagaacttcgttcccggagccgacgacgagtccctcgaggactccgccctg
tacgggaaggccgccatcgagcgcatcctgggtggcatgctgatcgacgaacggtcgcac
gacaccggccggtga
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