KEGG   Kocuria rhizophila: KRH_03630
Entry
KRH_03630         CDS       T00701                                 
Symbol
hup
Name
(GenBank) putative DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
krh  Kocuria rhizophila
Brite
KEGG Orthology (KO) [BR:krh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:krh03032]
    KRH_03630 (hup)
   03036 Chromosome and associated proteins [BR:krh03036]
    KRH_03630 (hup)
   03400 DNA repair and recombination proteins [BR:krh03400]
    KRH_03630 (hup)
DNA replication proteins [BR:krh03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    KRH_03630 (hup)
Chromosome and associated proteins [BR:krh03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    KRH_03630 (hup)
DNA repair and recombination proteins [BR:krh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      KRH_03630 (hup)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF2267 Phage_tail_terminator_8
Other DBs
NCBI-ProteinID: BAG28710
UniProt: B2GG87
LinkDB
Position
399963..400247
AA seq 94 aa
MAMNRSELVAEVAEKSGNTQAAVNGVLDSLFEVFESSVSKGEKITIPGWMSVERTDRAAR
QGRNPQTGEAIQIPAGHGVKLTAGSKLKAAVSSK
NT seq 285 nt   +upstreamnt  +downstreamnt
atggctatgaaccgcagcgaactcgttgccgaggttgccgagaagtccggcaacacccag
gccgccgtcaacggcgtgctggattctctcttcgaggtcttcgagagctccgtctccaag
ggcgagaagatcaccatccccgggtggatgtccgtggagcgcaccgaccgtgccgctcgc
cagggccgcaacccgcagaccggagaggccatccagatcccggccggccacggtgtcaag
ctcaccgcgggctccaagctgaaggctgccgtctcctccaagtga

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