Kocuria rhizophila: KRH_03630
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Entry
KRH_03630 CDS
T00701
Symbol
hup
Name
(GenBank) putative DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
krh
Kocuria rhizophila
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
krh03032
]
KRH_03630 (hup)
03036 Chromosome and associated proteins [BR:
krh03036
]
KRH_03630 (hup)
03400 DNA repair and recombination proteins [BR:
krh03400
]
KRH_03630 (hup)
DNA replication proteins [BR:
krh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KRH_03630 (hup)
Chromosome and associated proteins [BR:
krh03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KRH_03630 (hup)
DNA repair and recombination proteins [BR:
krh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KRH_03630 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
Phage_tail_terminator_8
Motif
Other DBs
NCBI-ProteinID:
BAG28710
UniProt:
B2GG87
LinkDB
All DBs
Position
399963..400247
Genome browser
AA seq
94 aa
AA seq
DB search
MAMNRSELVAEVAEKSGNTQAAVNGVLDSLFEVFESSVSKGEKITIPGWMSVERTDRAAR
QGRNPQTGEAIQIPAGHGVKLTAGSKLKAAVSSK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atggctatgaaccgcagcgaactcgttgccgaggttgccgagaagtccggcaacacccag
gccgccgtcaacggcgtgctggattctctcttcgaggtcttcgagagctccgtctccaag
ggcgagaagatcaccatccccgggtggatgtccgtggagcgcaccgaccgtgccgctcgc
cagggccgcaacccgcagaccggagaggccatccagatcccggccggccacggtgtcaag
ctcaccgcgggctccaagctgaaggctgccgtctcctccaagtga
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