Kocuria rhizophila: KRH_04990
Help
Entry
KRH_04990 CDS
T00701
Name
(GenBank) ATP-dependent helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
krh
Kocuria rhizophila
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
krh03019
]
KRH_04990
Enzymes [BR:
krh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KRH_04990
Messenger RNA biogenesis [BR:
krh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KRH_04990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
AAA_11
AAA_19
AAA_30
ESPR
AAA_22
Cas3-like_C_2
UvrD-helicase
MUCL1
Motif
Other DBs
NCBI-ProteinID:
BAG28846
UniProt:
B2GHK7
LinkDB
All DBs
Position
543004..545778
Genome browser
AA seq
924 aa
AA seq
DB search
MLTPFDLDRIGAGLPFAESVPELERALRGGVAVVQAPPGTGKTTVVPPVVANLVLAESGS
TASPAETADPTGPADVDDRGAHASSATAGAPGQSRISTDTAAPALDPTAARVVIVQPRRV
AARAAARRLAALTGTEPGGVVGWSVRGERKTSKATRVEFVTPGILLRRLLRDPELAGAAA
VVLDEVHERGVESDLLVGMLAELRQLREDLVLVAMSATVEAERFAGLLGGEAPAPVVDCP
SALHPLAVQWAPGPQRLDERGVTPSFLSHMARTAADAHRRALAQDPSVDALVFLPGAREV
SHVAAELRGLTDAEVLELHGQLPPREQDRAVAGRGPGERPRIVVTTSLAESSLTVNGVRL
VVDSGLARQPRRDAGRGISGLVTVSASKASAEQRAGRAARQGPGTVVRCYDDAAWGAMPA
HTVPEVRTADLTAACLALAVWGSPGGEGMALPDPLPPRARADADAELVRLGAVAEDGRAT
DLGRLLVSLPVEPRWGRALLDGADLVGARTAAEVIASVSDGARVPAADIPALVRGLRSSR
GGESTRWRREVQRLERMTAHPAAGGPADGSGEDTDAPPRGPEPDVPAEVREGVVVGLARP
EWMARRADAHGDQWLLASGTRAGLEAGSPLRHHEWLAVAELTRAAGRAAAGTGAVIRAAA
PLDLQHAQLVAGSLARTETRASFSNGRVSTREVRAVGAIELSATPVRADPDTAVPAIRAA
LAAEGLDLLPWDDAARGLRARLALLRRHLGQPWPAVDDAALLARAEEWLGPELRDVARGG
SLRSVRVADALRRLLPWPDAARLDELAPRRLDVPSGNTARIAYPEVFDEDDPARPPVVAV
KLQECFGWAETPRVADGRVPVQFHLLSPGKATLAITEDLASFWSGPYAQVRAEMRGRYPK
HPWPEDPWNAVATAKTSRALRREG
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgctcacccccttcgacctggaccgcatcggcgcggggctcccgttcgcggagtccgtt
cccgagctggagcgcgccctgcgtgggggagtggccgtggtccaggcccctccgggcacg
ggcaagaccacggtggtcccgcccgtcgtggccaacctggttctcgcggagagcgggtcc
acggcctcacctgccgagacagcagaccccaccggtccagcggacgtcgacgaccgcggt
gcgcacgcctcctccgccacggcgggagccccgggccaatcgcgcatttccacggacacg
gccgcccccgcgctcgatcccaccgccgcccgcgtcgtcatcgtccagccccgccgggtg
gccgcccgggccgccgcgcgccggctggcggcgctcacgggaacggagccgggcggcgtc
gtcggctggagcgtgcggggcgagcggaagacgtcgaaggccacgcgcgtggagttcgtg
acccccggaatcctgctgcgccgcctgctgcgggacccggagctggccggggccgcggcc
gtggtgctggacgaggtgcacgagcgcggcgtggagtcggacctgctcgtggggatgctt
gcggagctgcggcagctgcgggaggacctcgtgctcgtggcgatgtccgccacggtggag
gcggagcggttcgcgggtctgctgggaggggaggctcccgcgcccgtggtggactgcccg
tcggccctgcacccgctcgcggtccagtgggcgccgggcccgcagcgtctcgacgaacgg
ggcgtcaccccctcgttcctttcccacatggcccgcacagcggccgacgcacatcgcagg
gccctggcacaggacccgtccgtggacgccctcgtgttcctccccggcgcccgggaggtc
tcccatgtagccgccgagctgcgcggtctcaccgacgccgaggtcctggagctgcacggc
cagctgcccccgcgcgagcaggaccgcgccgtggcgggacgcgggccgggggagcgcccg
cgcatcgtggtcaccacgtccctcgcggagtcctcgctcacggtcaacggcgtgcgcctc
gtggtggactccgggctggcccgccagccccgccgggacgccgggcgcgggatctccggg
ctcgtcacggtctccgcgtccaaggcgtcggccgagcagcgcgccggccgcgccgcccgc
cagggcccgggcacggtggtgcgctgctacgacgacgccgcctggggcgccatgcccgcc
cacaccgtccccgaggtgcgcaccgcggacctcaccgccgcgtgcctcgcgctcgccgtg
tggggctccccgggtggggagggcatggccctgccggacccgctgccgccccgggcccgc
gcggacgccgacgccgagctggtccggctgggtgctgtggccgaggacggccgcgccacg
gatctcgggcgcctgctggtctccctgccggtggaaccccgctggggtcgcgccctgctg
gacggtgcggacctcgtgggcgccagaacggcggcggaggtcatcgcctcagtctccgac
ggcgcccgcgtgcccgccgcggacatccctgccctggtgcgcggtctgcgctcctcccgc
ggtggcgagtccacccggtggcgccgcgaggtgcagcggctggagcggatgacggcgcac
cccgcggccggcggcccggcggacggatccggggaggacacagacgcgccgccccgcggg
ccggaaccggacgtgcccgccgaggtccgggagggcgtcgtcgtgggcctggcgcggccc
gagtggatggcccggcgggcggacgcccacggggaccagtggctgctcgcctccggcacg
cgcgctgggcttgaggccgggagcccgctgcgccaccacgagtggctggccgtcgccgaa
ctgacgcgcgctgcgggacgggccgccgcgggtaccggcgcggtgattcgtgcggcggca
ccccttgacctgcagcacgcgcagctcgtcgcgggttcgctcgcgcgcaccgagacccgc
gcgagcttctcgaacgggcgtgtgagcacccgcgaggtgcgcgcggtgggcgcgatcgag
ctctccgccacgcccgtccgcgcggacccggacaccgccgtgcccgccatccgcgccgcg
ctcgccgccgagggcctggacctgctgccctgggacgacgccgcccgggggctgcgcgcg
cgcctcgccctgctgcgtcgtcacctggggcagccgtggcccgcggtggacgacgccgcc
ctgctcgcccgagccgaggagtggctgggccccgagctgcgggacgtggcccgcggcggg
tcgctgcgctcggtgcgggtggcggacgccctgcgccggctgctgccgtggcccgacgcc
gcccggctggacgagctggccccgcggcggctggacgtgcccagcgggaacaccgcccgg
atcgcctatccggaggtcttcgacgaggatgaccccgcccgcccgcccgtggtggccgtg
aagctccaggagtgcttcggctgggcggagaccccgcgcgtggcggacggccgcgtgccc
gtgcagttccacctgctctcccccgggaaggccacgctggccatcacggaggacctcgcc
tcgttctggtccgggccctacgcccaggtgcgcgcggagatgcgcgggcgctaccccaag
cacccctggcccgaggacccgtggaacgcggtggccaccgccaagacctcgcgggccctg
cggcgggagggctga
DBGET
integrated database retrieval system
