Kocuria rhizophila: KRH_05520
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Entry
KRH_05520 CDS
T00701
Name
(GenBank) putative RNA polymerase ECF-type sigma factor
Organism
krh
Kocuria rhizophila
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
zf-HC2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
BAG28899
UniProt:
B2GI44
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Position
607885..609624
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AA seq
579 aa
AA seq
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MPDSAGSGPRDPGVHTEHPASDEQLLTAVREGDSSAFAELYERHRGAVLAVARMHSRNDA
DAQDLVSEAFTRVLGLLREGRGPRQFLRAYLVTAVSRLAADRANDLTRTRPEAPQPNGPL
DRVELFDDLVVKQVDSAVVAQAFASLPERWQEILWYLEVEGRRPRQVASVVGVQPNAVSA
LGKRAREGLRTAYMQEHVSAQALEDCYQFSSQLGAFARGALTPSRTAVVQDHLDGCRRCT
AEYLQLQDLGLGLRGWMLPVLAGLPLWGGAGGRLAESLGGLPLLGGSPALAAAGGAGAGT
TGAGGTAGVVDAAGVRGLAGTGGAAGAADAAGAAAGTAGTGGAAGTGAAASAAGSSAAGS
AAGGLGAVLGSSTGLALAVGAVLVVGASTAGLVALNSGSEEAPPTAAGSAEPGGAGSRAA
AEPGRQDPASGAPVQGAAPGGNGAAVPDADQAQGASGAEAAQDAAVERSESTALPAPFLP
DVDPAIVGPVPDLPVSVPYPTLPRVDGDPVPPDPVDPEPASPDPVSPDPVEPTPSPVPTV
PEPTPSPGGGGATPAPTPTPSDGSCHWVPIPWGIEVCIP
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgccagacagtgcaggttccgggccccgtgatccgggggtccacaccgagcaccccgcg
agcgacgagcagctgctcaccgccgtgcgcgagggtgactcctccgcgttcgccgagctc
tacgaacgccaccgcggggccgtgctggccgtggcccgcatgcactcccgcaacgacgcc
gacgcccaggacctcgtgtccgaggccttcacccgcgtgctggggctgctgcgcgagggc
cgcgggccccggcagttcctgcgcgcctacctggtcactgccgtctcccgcctggccgcg
gaccgcgcgaacgacctcacccgcacccgccccgaggcaccccagcccaacggtccgctg
gaccgcgtggagctcttcgacgacctcgtggtcaagcaggtggactccgccgtggtggcg
caagccttcgcgagcctgccggagcgctggcaggagatcctgtggtacctcgaggtcgag
gggcgccgcccgcggcaggtggcctccgtggtgggcgtccagcccaacgccgtgtccgcc
ctcggcaagcgcgcccgcgaggggctgcgcaccgcctacatgcaggagcacgtctccgcg
caggcgctggaggactgctaccagttctcctcccagctgggcgccttcgcccggggcgcg
ctcaccccctcccgcaccgccgtggtccaggaccaccttgacggctgccgccgctgcacc
gccgagtacctccagctccaggacctcgggctcgggctgcgcggctggatgctgcccgtg
ctcgccgggctgcccctgtggggcggggccggcggccggctcgcggagtccctcggaggg
ctgccgctgctcggtggttcccccgcgctcgccgccgcgggaggtgccggggccggcacc
accggggctggcggcacggccggggttgtcgacgccgccggggtgcgcggtctcgccggg
acgggtggcgctgccggagctgccgacgccgccggggcggccgctggaacggctggaacg
ggcggtgccgcggggacgggcgccgcggcgtcggccgcgggatcctctgcggcgggctcc
gccgcgggcggactcggagcggtgctggggtccagcacggggctcgcgctcgccgtgggc
gcggtgctcgtggtcggtgcctccaccgcgggactcgtggccctgaacagcggttccgag
gaggccccgcccacggccgcgggctcggccgagccgggcggagcgggcagccgtgccgcg
gcggagcctggcaggcaggaccccgcgagcggtgcgcccgtacagggggccgcgcccggc
gggaacggcgccgccgtgccggacgcggaccaggcccagggtgcgtcgggtgccgaggcc
gcccaggacgccgcggtggagcggtccgagtccaccgccctgcccgccccgttcctcccg
gacgtcgacccggccatcgtgggccccgtgcccgacctgccggtgtccgtgccgtacccc
accctcccgcgcgtggatggcgaccccgtgccgcccgatcccgtggatccagaaccggcg
agccccgatccggtgagccccgacccggtcgagcccacccccagccccgtgcccaccgtc
cccgagcccacgccgagcccgggcggcggcggtgccacccccgcacccacacccacccct
tccgacggctcgtgccactgggtccccataccctggggcatcgaggtctgcatcccgtag
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