Kocuria rhizophila: KRH_08290
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Entry
KRH_08290 CDS
T00701
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
krh
Kocuria rhizophila
Pathway
krh00300
Lysine biosynthesis
krh01100
Metabolic pathways
krh01120
Microbial metabolism in diverse environments
krh01230
Biosynthesis of amino acids
Module
krh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KRH_08290 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
krh01002
]
KRH_08290 (dapE)
Enzymes [BR:
krh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
KRH_08290 (dapE)
Peptidases and inhibitors [BR:
krh01002
]
Metallo peptidases
Family M20
KRH_08290 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
BAG29176
UniProt:
B2GKP7
LinkDB
All DBs
Position
896595..897701
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AA seq
368 aa
AA seq
DB search
MASDQQTPVLDLTMDPADLTAALVDVESVSDHEGPLADAVEAALRELPHLTVHRDGDTVV
ARTELGRDERVILAGHLDTVPLPTVEGALGAVPSVRRREGDRDVIYGRGTTDMKGGVAVQ
LALVQQLREPNRDVTYVFYDHEEVSSDASGLGRVMRNGPELLEADFAVLLEPTNGTVEGG
CNGTMRFRITTHGKASHSGRAWIGDNAIHKQAELLERLARYEPRTVTVEGLDYREGLNAI
RIGGGVAGNVIPDTAWVEVNYRFAPDKTLQQAQQHVREVFEGYEIEWQDLSPAARPGLDR
PAAAQFVAAVGQEPMPKYGWTDVARFSEAGVPAVNFGPGDALLAHTDDEHVVDDAVRACH
RALSQWLS
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgatcagcagacacccgtactcgacctcaccatggaccccgcggacctcacg
gccgcgctcgtggacgtggagtccgtctcggaccacgaggggccgctcgccgacgccgtg
gaggcggccctgcgcgagctgccgcacctcacggtgcaccgggacggggacaccgtggtg
gcccgcaccgagctgggacgggacgagcgggtgatcctggccgggcacctggacaccgtg
cccctgcccaccgtggagggggcgctgggcgcggtgccgtccgtgcggcgtcgtgagggg
gaccgggacgtgatctacggccgcggcaccacggacatgaagggcggggtggcggtgcag
ctcgcgctggtgcagcagctgcgggagccgaaccgggacgtcacgtacgtgttctacgac
cacgaggaggtctccagcgacgccagcggtctggggcgcgtgatgcgcaacgggcccgag
ctgctcgaggcggacttcgcggtgctgctggagcctaccaacggcacggtggagggcggg
tgcaacggcaccatgcgattccggatcaccacccacggcaaggcctcgcactcggggcgc
gcctggatcggggacaacgcgatccacaagcaggcggagctgctggagcggctggcgcgc
tacgagccgcggaccgtcaccgtggagggcctggactaccgcgaggggctcaacgccatc
cggatcggcgggggagtggccggcaacgtgatcccggacaccgcgtgggtggaggtcaac
taccgatttgccccggacaagacgctgcagcaggcgcagcagcacgtgcgcgaggtgttc
gaggggtacgagatcgagtggcaggacctctccccggcggcgcgccccggactggaccgc
cccgccgccgcgcagttcgtggccgcggtgggccaggagcccatgcccaagtacggctgg
acggacgtcgcccgtttctcggaggcaggggtgcccgccgtgaacttcggtccgggggac
gccctgctggcccacacggacgacgagcacgtggtcgacgacgccgtgcgcgcgtgccac
cgggcgctgtcccagtggttgtcctga
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