Kocuria rhizophila: KRH_08570
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Entry
KRH_08570 CDS
T00701
Symbol
dnaQ
Name
(GenBank) putative DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
krh
Kocuria rhizophila
Pathway
krh03030
DNA replication
krh03430
Mismatch repair
krh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KRH_08570 (dnaQ)
03430 Mismatch repair
KRH_08570 (dnaQ)
03440 Homologous recombination
KRH_08570 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
krh03032
]
KRH_08570 (dnaQ)
03400 DNA repair and recombination proteins [BR:
krh03400
]
KRH_08570 (dnaQ)
Enzymes [BR:
krh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KRH_08570 (dnaQ)
DNA replication proteins [BR:
krh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KRH_08570 (dnaQ)
DNA repair and recombination proteins [BR:
krh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KRH_08570 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
BAG29204
UniProt:
B2GL28
LinkDB
All DBs
Position
complement(925254..925952)
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AA seq
232 aa
AA seq
DB search
MAADAPWHQGPRACFDLETTGRDPQQARIVTASVVLVSPAGDVLQEWEWLADPGVEIPEE
AAAVHGVSTDRARAEGRPVAEVAAELSEVLAGFWREGVPVLAFNAAYDLTVLTRETERHG
LPAPEPFPVLDPFVLNKQVHRYRRGKRTLGALCEEYGVVLDAAHTSAEDALATERLAAAL
ADRFAELRQPAAALHEAQIGWAAEQAASLQEYFRRKDPTAVVDGTWPVHPRP
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
gtggcggcggatgccccgtggcaccagggcccccgcgcgtgcttcgacctggagaccacc
gggcgcgacccccagcaggcgcgcatcgtgaccgcctcggtggtgctcgtctcccctgcg
ggggacgtgctgcaagagtgggagtggctggccgaccccggcgtggagatccccgaggag
gccgccgcggtgcacggggtctccacggaccgcgcccgcgccgagggacgccccgtggcc
gaggtggccgccgagctgagcgaggtcctggcggggttctggcgcgagggcgtcccggtg
ctggcgttcaacgccgcctacgacctcacggtgctcacgcgcgagaccgagcgtcacggt
ctgcccgccccggagcctttccccgtgctggacccgttcgtgctcaacaagcaggtgcac
cgctaccgccggggcaagcgcacgctgggtgcgctgtgcgaggagtacggtgtggtgctc
gacgccgcccacacctccgccgaggacgccctggccaccgagcggctcgccgccgccctc
gccgatcgtttcgcagagctccgtcagcccgccgccgcgctgcacgaggcgcagatcggg
tgggccgccgagcaggccgcctccctgcaggagtacttccgccgcaaggaccccaccgcg
gtcgtggacggcacgtggcccgtccacccgcggccgtag
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