Kocuria rhizophila: KRH_10090
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Entry
KRH_10090 CDS
T00701
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
krh
Kocuria rhizophila
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
krh03400
]
KRH_10090 (sbcD)
DNA repair and recombination proteins [BR:
krh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KRH_10090 (sbcD)
Archaeal homologous recombinant proteins
KRH_10090 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
BAG29356
UniProt:
B2GFI3
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All DBs
Position
1095112..1096335
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AA seq
407 aa
AA seq
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MLMLHTSDWHLGRTFHGVDILDVQARAMTEIVAWVREYDVSVVLVSGDVYDRAQPRTEVV
ELLNRTLGEIREAGAQVVLTSGNHDSPARLGFGSQIMSHGGVHLLTTLEDAWRPALFTQR
DGRLTVSRGAVPAGEPSAGSPVAAAEDTTVAVYGIPYLEPRAAAPLLDCAPTHQGVLGAV
TARIDDARNRPGVPTVVMAHAFVTGAEPTDSERVVDSGGLGTASAEIFAGHDYTALGHLH
RRQRVIETVRYSGSPVAYSFSEAEHSKGAWLVDVRSDGVHGVTPLDHASGMRLARLRGQL
DALLTEPEHTRAQDAWCQVVLTDAERPAAAMERVRTRFPHTVELRWEPEGSRAATPLGYS
ARVAGVASPGELCARFYDHVRGRSLSPSEAAELDDAVAAVCEKGAGR
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgctgcacacctccgactggcacctgggacgcacgttccacggggtcgacatc
ctggacgtccaggctcgggccatgacggagatcgtcgcgtgggtccgtgagtacgacgtc
tcggtggtgctcgtctccggggacgtctacgaccgtgcccagccccgcacggaggtggtg
gagctgctcaaccgcacactgggtgagatccgtgaggccggggcccaggtggtcctcacg
agcggcaaccacgactccccggcccgtctcggcttcgggtcgcagatcatgtcccatggc
ggcgtccacctgctgaccacacttgaggacgcatggcggccggcgctgttcacgcagcgc
gacggtcggctcacggtgtcccggggcgcagtgccggcgggagagccctccgccggttcc
cccgtcgccgccgcggaggacaccacggtggccgtctacggcatcccctacctagaaccg
cgcgccgccgcgcccctcctggactgtgcacccacccaccagggtgtcctgggtgcggtg
acggcgcggatcgacgacgcccgcaaccgtcccggggtccccaccgtggtgatggcccac
gccttcgtcacgggcgccgagcccaccgactcggagcgggtggtcgactcgggcggactg
ggcacggcgtccgcggagattttcgcgggacacgactacaccgccctgggccacctgcac
cgacggcagcgcgtcatcgagaccgtgcgctacagcggatcgcccgtggcctactcgttc
tcggaggcggagcactccaagggtgcgtggctcgtggacgtgcggtccgacggcgtgcac
ggggtgacgcccctggaccatgcgtccgggatgcgcctggcccggctcaggggacagctc
gacgcgctgctgacggagccggagcacacccgtgcccaggacgcctggtgccaggtggtg
ctcacggacgccgaacgccccgccgcggccatggaacgggtccgcacccggttcccccac
accgtggagctgcgctgggaaccggagggaagccgggccgccaccccgctgggctacagc
gcacgagtcgccggtgtcgccagcccgggggagctgtgcgcccggttctacgaccacgtc
cggggccggtcgctctcgccgtccgaggccgccgagctggacgacgcggtggcggccgtg
tgcgagaagggagccgggcgatga
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