Kocuria rhizophila: KRH_10100
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Entry
KRH_10100 CDS
T00701
Symbol
sbcC
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
krh
Kocuria rhizophila
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
krh03400
]
KRH_10100 (sbcC)
DNA repair and recombination proteins [BR:
krh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KRH_10100 (sbcC)
Archaeal homologous recombinant proteins
KRH_10100 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BAG29357
NITE:
KRH_10100
UniProt:
B2GFI4
LinkDB
All DBs
Position
1096332..1099571
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AA seq
1079 aa
AA seq
DB search
MRLHRMEITAFGPFAGQEVVDFEGLNRAGVFLLNGETGSGKTSVLDAICFALYGTGPTTA
AKGGRKAQHSDHADPHTGPRVDVEFSAGGRRWHVSRTPAWREPSSRAASGWTERHATVLL
RESVEGQWMERGYRPDDVGQQIHHAIGLDREQFTQVMMLPQGRFARFLQAGSKEREELLE
TLFGTDVYAGIQDELKARADHAKQQLRDAGAEAQRTEELLERFRARLLAAVEELPARAQD
EVEGTPVASWAPREQAVDETGPSDGPAQWTDPTGETPSATGNEDDGRGPEDARDVTARWA
DLAGAGGALVDAVDRARQRAAEEFTVAQRRAAGLEAARERLDHFDSLTRRREKLSEEHER
AQDAARTLQEHDAAHQLQDVVQASRTATREETEAAQRVSDLRTELAPQSPPGRSGRQVLA
EHAPLLDEQLAARAFSASLRDAAVAAREAARRAVERAGALERDRADMERETRHLQQLEGA
EQQLRERMEGERVALAEREHDLEQLRSDTRDEALVRERARSARAAVEASRDYEHARATAE
QRGRDYERDETARREAARHVEGLEALRFEHAASALAEELAPGAPCPVCGSTCHPEPATAA
PGDEVTVADLERARAARDAAQDTADASHATWQRAQHAAAEALGRGAEEDLDAVVERARRA
AEEETELVARLERAERIARAVASGRETLAEVEERAASTSAEAASARIRVDAAAQHCDRER
EQLAQSLRGFRDAPRFLEHAEQLLEHLDAWESAHRAHEQAREHARLSTHALERAVSASPF
DGAADVSRALLEPGEARELRTWWEAHERDAAALDAELATEEMRRAAALDGPEREELSDAA
LSRAALARDDLDMLRDRLTRQLGGLHALVEDITATASQIPDQDARHRGIRERAATLGGLA
DVATATSSENSLRMTLTSFVLAAKLEQVAAVASEHLSRMSSGRFTLVHTDQTRGGGKSGL
GLEIDDSWTGVRRGTETLSGGESFFTSLALALALADVVRAEAGGRDIDTLFVDEGFGSLD
EQTLEQVLETLDGLRRDGRVIGVVSHVSEMKQRIDTQLVVTKTPQGSHLGIEADPWSPA
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgagactgcaccggatggagatcacggcgttcgggccgttcgccggccaggaggtcgtg
gacttcgaggggctcaaccgcgccggggtgttcctgctcaacggggagacgggttccggc
aagaccagcgtgctggacgcgatctgcttcgcgctctacggaacgggacccaccacggcg
gccaagggcggacgcaaggcccagcacagcgaccacgccgacccccacaccgggccacgg
gtggacgtcgagttctcggccgggggtcgccgctggcacgtgagccgcacgcccgcgtgg
cgagagccctcctcgcgcgccgcctcgggatggaccgaacgccacgccaccgtgctgctg
cgcgagtcggtcgagggccagtggatggagcgtggctaccggccggacgacgtggggcag
cagatccaccacgcgatcgggctggaccgcgagcagttcacccaggtcatgatgctgccc
cagggccgtttcgcccgtttcctgcaggccgggtccaaggaacgggaggagctgctggaa
accctcttcggcaccgatgtgtacgccgggatccaggacgagctcaaggcccgggcggat
cacgccaagcagcagctgcgggacgcgggcgccgaggcgcagcgcaccgaggagctgctg
gaacgcttccgcgccaggctgctcgcggccgtggaggagctgcccgctcgagcccaggac
gaggtcgaggggaccccggtggcgtcgtgggcgccgcgggaacaggcggtggacgagacc
gggccatcggacgggcccgcgcagtggacggaccccacgggggagaccccgagcgccacg
ggcaatgaggacgacggccgcggtccggaggatgcccgcgacgtcactgcccggtgggcg
gacctcgccggggccggtggtgcgctcgtggacgcggtggaccgcgctcgtcagcgagcc
gccgaggagttcacggtggcccagcgcagggccgctgggctcgaggccgcgcgggaacgg
ctggaccacttcgacagcctcacccgacggcgcgaaaaactgtccgaggagcacgagcgc
gcgcaggacgccgcccgcacgctgcaggagcacgacgccgcgcaccagctccaggacgtc
gtccaggcctctcgcacggccacccgggaggagacggaggcggcgcagcgcgtcagcgat
ctccgcaccgaactcgccccgcagagcccgccggggcgctccggccgccaggtgctggcg
gagcacgccccgctgctggacgagcagctggcggcgagggcgttctcggcgtcgttgcgc
gatgccgccgtggccgcgcgggaggcggcccgccgggccgtcgaacgggccggggccctg
gagcgggaccgggccgacatggagcgcgagacccggcacctgcagcagctggagggggcg
gagcagcagctgcgggagcggatggagggcgaacgcgtggccctcgccgaacgggagcac
gacctggagcagctgcgctcggacaccagggacgaagccctcgtgcgagagcgggcccgc
agtgcacgggccgcggtggaggcgagccgggactacgagcacgccagggccacggcggag
cagcggggccgggactacgagcgggacgagaccgcccgccgggaggccgcccgtcacgtg
gaggggctggaggcgctgcgcttcgagcacgcggcctcggcactggccgaggagctggca
ccgggggcaccgtgcccggtgtgcggttccacgtgccaccccgaaccggccaccgcggct
ccgggtgacgaggtcacggtggcggacctggagcgtgcccgggccgcacgggacgccgca
caggacactgcggatgcctcccacgccacgtggcagcgggcccagcacgccgccgccgag
gccctgggacgcggggcggaggaggatctcgacgccgtggtggaacgcgcacggcgggcc
gccgaggaggagaccgagctcgtcgcgcggctcgagcgggcggagcgcatcgcccgcgcg
gtcgcctcggggcgcgagacgctcgccgaggtggaggaacgtgctgcgagcacgagtgcc
gaggccgccagcgcacggatccgggtggacgcggcggcacagcactgcgaccgtgagcgc
gagcagctcgcgcagagcctgcgaggcttcagggacgccccgcggttcctggagcacgcc
gagcagctgctggagcacctcgacgcttgggagagcgcccacagggcgcacgagcaggcc
cgggagcacgcccgactcagcacgcacgctctggaacgcgcggtgtccgcctcaccgttc
gacggcgcggcggacgtctcccgcgcactgctggaaccgggggaggcccgggagctccgg
acctggtgggaggcccacgagcgggatgccgccgccctcgacgccgagctcgccacggag
gagatgcgccgcgccgcggccctcgacgggccggaacgcgaggaactctccgacgccgcc
ctgtcccgcgcggccctcgcgcgcgacgatctggacatgctgcgtgaccggctcacccgg
cagctcgggggtctgcacgccctcgtcgaggacatcaccgccaccgcgagccagatcccg
gatcaggacgcccgccaccgcggcatccgggagcgcgcggccacgctcggcggtctcgcg
gacgtggccaccgccacgtcctccgagaactccctgcgcatgaccctgacctcgttcgtg
ctcgcggccaagctcgagcaggtggccgccgtggcctccgagcacctcagccgcatgtcc
tccggtcgcttcaccctggtgcacacggaccagacccggggcggcggcaagtcggggctc
ggcctcgagatcgacgactcctggaccggtgtgcgccgcggcaccgagacgctgtccggg
ggtgagtccttcttcacctccctcgcgctggccctcgcgctcgcggacgtggtgcgggcg
gaggccggtggccgggacatcgacacgttgttcgtggacgagggtttcggctccctggac
gagcagaccctggagcaggtgctggaaaccctcgacgggctgcgccgtgacggacgggtg
atcggcgtggtgtcccacgtcagcgagatgaagcagcggatcgacacgcaactggtcgtg
actaagaccccccagggctcccacctcggcatcgaggcggacccgtggtctcccgcgtag
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