Kocuria rhizophila: KRH_10480
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Entry
KRH_10480 CDS
T00701
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase/AP lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
krh
Kocuria rhizophila
Pathway
krh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KRH_10480 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
krh03400
]
KRH_10480 (mutM)
Enzymes [BR:
krh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KRH_10480 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KRH_10480 (mutM)
DNA repair and recombination proteins [BR:
krh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KRH_10480 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
BAG29395
UniProt:
B2GFM2
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All DBs
Position
1143441..1144370
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AA seq
309 aa
AA seq
DB search
MPELPEVEVVRRGVERWVVGRTVESVQVFDARSLRRHTAGVLDFQERLAGLTVESAQRRG
KFLWLPLRERTGSKPSQALLVHLGMSGQLLVASADQPQPRHERIRLALSPAHDDAGAALP
EQARFVDQRIFGGMLLDPLAPSTDGHGTVPEHAAHIARDPLDPLFDVDAFHTALRRRRTG
LKRALLDQGLISGIGNIYADEALWAAKLHWAAPTETMTAPRTRELVAACQEVMRRALEAG
GTSFDSLYVNVNGESGYFSRSLNAYGRAGQPCPRCEAAGLDGVIVREQFANRSSYRCSRC
QRKPRRARV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctccccgaggtcgaggtggtccgccgcggcgtcgaacgctgggtcgtgggc
cgcaccgtcgagtccgtgcaggtcttcgacgcccggtccctgcgccgtcacacggccggt
gtcctggacttccaggagcgcctggccgggctgaccgtggagtccgcgcagcggcgcggc
aagttcctgtggctcccgctgcgcgagcgcaccggtagcaagccgtcccaggcgctgctc
gtgcacctgggcatgagcggtcaactcctggtggcctccgcggaccagccgcagccgcgc
cacgagcgcatccgcctcgcgctttctccggcccacgacgacgccggtgccgccctcccg
gagcaggcccggttcgtggaccagcggatcttcggcggcatgctgctcgacccgctcgcg
cccagcacggacggtcacggcacggtgccggagcacgccgcgcacatcgcgcgcgacccc
ctggacccgctcttcgacgtggacgccttccacaccgccctgcgccgacgccgcacgggc
ctgaagcgtgcgctgctggaccaggggctgatctcggggatcggcaacatctacgcggac
gaggccctgtgggccgccaagctgcactgggccgcacccaccgagacgatgaccgcgccc
cgcacccgcgagctggtggcggcgtgccaggaggtcatgcgccgcgctctggaggcgggc
ggcacgagcttcgactcgctgtacgtcaacgtgaacggggagtccgggtacttctcgcgc
tcgctcaacgcctacggccgggccgggcagccgtgcccgcgctgcgaggctgcgggcctg
gacggtgtgatcgtgcgcgagcagttcgcgaaccgttcctcgtaccggtgctcgcggtgc
cagaggaagccgcggcgggcgcgggtctga
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integrated database retrieval system
