Kocuria rhizophila: KRH_11870
Help
Entry
KRH_11870 CDS
T00701
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
krh
Kocuria rhizophila
Pathway
krh03030
DNA replication
krh03410
Base excision repair
krh03420
Nucleotide excision repair
krh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KRH_11870 (polA)
03410 Base excision repair
KRH_11870 (polA)
03420 Nucleotide excision repair
KRH_11870 (polA)
03440 Homologous recombination
KRH_11870 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
krh03032
]
KRH_11870 (polA)
03400 DNA repair and recombination proteins [BR:
krh03400
]
KRH_11870 (polA)
Enzymes [BR:
krh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KRH_11870 (polA)
DNA replication proteins [BR:
krh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KRH_11870 (polA)
DNA repair and recombination proteins [BR:
krh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KRH_11870 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KRH_11870 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
SMC_hinge
Motif
Other DBs
NCBI-ProteinID:
BAG29534
UniProt:
B2GGW1
LinkDB
All DBs
Position
1314918..1317800
Genome browser
AA seq
960 aa
AA seq
DB search
MTETSQQPSQDPSAPRTVVIGEKTDAPQQVPLPEPVSRPEKRLLLIDGHSLAFRAFFALS
RAAEYGNGPGFVTSEGVHTEGVYGFVNTMVKLVREEKPTHLVVSFDLEGPTLRSQEYGEY
KGGRDETPEEFHGQVPNIQRVLEALGVPIVTMEGHEADDVLATLASRAAAEDFEVLVFSG
DRDAFQMITDHVTVVYPGRTPSDLRRMDAAAVYEKYKVAPQNYPDLAALTGETADNLPGV
PGVGPGFAAKWITAYGPVDSLLEHAGQITGKKGEALRENEELVRRNRKLNRLVTDLPLEI
DLSATALPKAHAERVAEVFDELEFGSQLRGRLLEAFAAQTSGDDVAALAPVTDVTRVHTA
PEFADWLEAQDQDAPVVVRRLSADPKAPSGEEVTALVLTGTTGAALDLVAADQELTRAVE
QWLGDTTAAKVVDGLKDLYHGLIQRGIVLAGVVDDVQLSGYLVRPALRSYELESQLAQHL
EVEVPAAEESTGGADAHGQTALALEDEDALGGVSDAVLVREATLGRACRELSEHLRALLE
ADGQLGLLTELEMPLAVILARMEATGIAMDRPGIDVLFEDLQHPIDQAFEQAQAQIDHEV
NLGSTKQLQAVMFDELGLPKTKKTKTGYTTDASAVADLIGKVSPDTAGSRFLVALMNWRE
YSKLKQIVAGLRDAIAEDGRIHTTYQQTVAATGRLSSTGPNLQNIPVRTEQGQRIRDVFV
VGEDTQGPFECLMTADYSQIEMRIMAHLSGDEGLIEAFRGGEDLHRFVGSRVFDVAPEDV
TPQMRSKVKAMSYGLVYGLSSYGLSQQLHIGVDEARTMMSGYFERFGGVRDFLRGVVEEA
RSKGYTETIDGRRRYLPDLTSDNRQARQAAERMALNAPIQGSAADIIKKAMIGVDRALRD
GQLRSRVLLQVHDELIVEVAPGEREEVERILRTEMAGAAELTVPLDVNVGTGRTWHQAAH
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagacgagccagcagcccagccaggatccgagcgcaccccgcacggtggtgatc
ggcgagaagaccgacgccccgcagcaggtgcccctgcccgagccggtgtcccgcccggag
aagcggctgctgctcatcgacggccactccctggcgttccgcgccttcttcgcgctctcc
cgtgcggcggaatacggcaacggcccgggcttcgtcacctccgagggggtgcacaccgag
ggcgtctacggcttcgtgaacaccatggtcaagctggtgcgggaggagaagcccacccac
ctggtggtttccttcgacctcgagggtcccacgctgcgctcccaggagtacggggagtac
aagggcggccgtgacgagacccccgaggagttccacggccaggttcccaacatccagcgc
gtcctcgaggccctgggcgtgccgatcgtcaccatggaggggcacgaggcggacgacgtc
ctggccacgctcgcctcccgcgccgcggccgaggacttcgaggtcctcgtgttctccggg
gaccgtgacgcgttccagatgatcaccgaccacgtcaccgtggtctaccccggtcgcacg
ccctcggacctgcgccggatggacgcggccgccgtgtacgagaagtacaaggtggctccc
cagaactacccggacctcgcggcgctcacgggggagaccgcggacaatctcccgggtgtc
ccgggcgtcggtcccgggttcgccgccaagtggatcaccgcctacggccccgtggactcg
ctgctggagcacgccgggcagatcaccggcaagaagggcgaggcgctgcgcgagaacgag
gagctcgtgcgccgcaaccgcaagctcaaccgcctggtcacggacctgcccctcgagatc
gacctctccgcgacggccctgccaaaggcgcacgcggagcgcgtggcggaggtcttcgac
gagctcgagttcggctcccagctgcgcggtcgtctgctcgaggccttcgcagcgcagacc
tccggggacgacgtcgccgcgctcgcccccgtcacggacgtcacccgggtgcacaccgcc
ccggagttcgccgactggctcgaggcgcaggaccaggacgcacccgtcgtcgtgcgccgg
ctgagcgcggaccccaaggcgccctcgggcgaggaggtcaccgccctggtgctcacgggc
accacgggcgcggccctggacctcgtggccgccgaccaggagctgacccgcgccgtggag
cagtggctcggagacaccaccgcggccaaggtcgtggacggcctcaaggacctctaccac
gggctgatccagcggggcatcgtgctggccggggtggtggacgacgtccagctctcgggc
tacctcgtgcgcccggccctgcgctcctacgagctggagtcgcagctggcccagcacctg
gaggtcgaggtcccggccgccgaggagagcaccggcggcgcggacgcgcacggacagacc
gcgctcgcactggaggacgaggacgcgctcggcggtgtcagcgacgccgtgctggtccgt
gaggccacgctggggcgggcgtgccgcgaactgagcgagcacctgcgggcactgctcgag
gcggacgggcagttggggctgctcaccgagctcgagatgccgctcgccgtgatcctcgcc
cgcatggaggccacggggatcgccatggaccgcccggggatcgacgtcctgttcgaggac
ctgcagcaccccatcgaccaggcgttcgagcaggcccaggcccagatcgaccacgaggtc
aacctgggctccaccaagcagctgcaggccgtgatgttcgacgagctcggcctgcccaag
accaagaagaccaagaccggctacaccacggacgcctcggccgtcgcggacctgatcggc
aaggtctccccggacaccgccgggtcacgcttcctcgtggcgctcatgaactggcgcgag
tactccaagctcaagcagatcgtggccggactgcgggacgccattgccgaggacgggcgc
atccacaccacctaccagcagacggtggcggccaccgggcggctgtcctccaccgggccc
aacctgcagaacatcccggtgcgcaccgagcagggccagcgcatccgagacgtcttcgtc
gtgggggaggacacccaggggcccttcgagtgcctgatgactgccgactactcgcagatc
gagatgcgcatcatggcgcacctgtccggggacgaggggctcatcgaggccttccgcggc
ggtgaggacctgcaccgcttcgtgggctcccgcgtgttcgacgtggccccggaggacgtc
accccgcagatgcgctccaaggtcaaggccatgagctatggcctcgtctacgggctgagc
tcctacggactctctcagcagctgcacatcggggtggacgaggcccggaccatgatgagc
ggctacttcgagcgcttcgggggcgtgcgggacttcctgcgcggcgtcgtggaggaggcc
cgctccaagggctacaccgagaccatcgacggccgccgccgctacctcccggacctcacg
agcgataaccgccaggcccgccaggccgccgagcgcatggccctgaacgcccccatccag
ggctcggccgcggacatcatcaagaaggcgatgatcggcgtggaccgcgcgctgagggac
gggcagctgcgctcccgcgtgctgctgcaggtccacgacgagctcatcgtggaggtggcc
cccggtgagcgcgaggaggtggagcggatcctgcgcaccgagatggccggggccgcggag
ctcaccgtcccgctggacgtcaacgtgggcaccggccgcacgtggcaccaggcggcgcac
tga
DBGET
integrated database retrieval system
