Kocuria rhizophila: KRH_13220
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Entry
KRH_13220 CDS
T00701
Name
(GenBank) putative ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
krh
Kocuria rhizophila
Pathway
krh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KRH_13220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
krh02000
]
KRH_13220
Transporters [BR:
krh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
KRH_13220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
nSTAND1
AAA_22
RsgA_GTPase
NACHT
nSTAND_NTPase5
AAA_16
AAA_25
AAA_28
AAA_30
SbcC_Walker_B
AAA_33
AAA_23
Dynamin_N
TruB_C
ATP-synt_ab
Cytidylate_kin
AAA
T2SSE
ATPase_2
MMR_HSR1
AAA_14
DUF87
Motif
Other DBs
NCBI-ProteinID:
BAG29669
UniProt:
B2GI77
LinkDB
All DBs
Position
complement(1487703..1488407)
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AA seq
234 aa
AA seq
DB search
MRGVRKTYPGAGRPALDGVDLTLHRGETLAVLGPSGSGKSTLLRAIAGLETLDEGTIEFG
DPDARLAVVFQSPALFPWLSVRRNVALGGRYRRNRDRFDEERVGELLEVLGLDQLAHTPV
QELSGGQAQRVSVGRALAVHPDVLLLDEPFSALDPATREDLQQWLRQLTTDLGLTVFLVT
HDVAEAMSLGDRIGFFAGPRGFRRQWVPSRDATTAEQILATYRGVDDEAGTWEI
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcggtgtccgcaagacctatccgggcgctgggcggcccgccctcgacggcgtggac
ctcaccttgcaccggggcgagactctcgccgtgctcggacccagtggctccggtaagtcc
accctgctgcgcgccatcgccggcctcgaaaccctcgacgagggcaccatcgagttcgga
gacccggatgcccgcctggccgtcgtgttccagtccccggcgctgttcccatggctgtcc
gtgcggcgcaacgtcgccctcggcggcaggtaccgccgcaatcgcgatcgcttcgacgag
gagcgcgtgggcgagctgctcgaggtcctcggcctcgaccagctcgcccacacccccgtt
caggagctctccggcggccaggcgcagcgggtgtccgtgggtagggcactcgccgtgcac
ccggacgtgctgctgctcgacgagcccttcagcgcgctggaccccgccacccgtgaggac
ctgcagcagtggctgcggcagctgaccactgacctcgggctgacggtcttcctggtcacg
cacgacgtcgccgaggcaatgtccctgggggacaggatcgggttcttcgccgggcctcgg
ggtttccgccgccagtgggttccctcccgggacgccaccacggccgagcagatcctggca
acgtaccgcggtgtcgacgacgaagcgggaacctgggagatatga
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