Kocuria rhizophila: KRH_14110
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Entry
KRH_14110 CDS
T00701
Symbol
rnd
Name
(GenBank) putative ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
krh
Kocuria rhizophila
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
krh03016
]
KRH_14110 (rnd)
Enzymes [BR:
krh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KRH_14110 (rnd)
Transfer RNA biogenesis [BR:
krh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KRH_14110 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
BAG29758
UniProt:
B2GJ53
LinkDB
All DBs
Position
1587719..1588981
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AA seq
420 aa
AA seq
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MVPGFEHLAIPATVHLNGPAEGLPRVVDTARGLSRAAEQLAAAHGPVAVDTERASGFRYG
QRAFLVQLRREGAGTVLIDPEAVGSLAEVDEALRGVEWVLHAATQDMPCLAELDMHPDEL
FDTELGGRLLGLRKVGLASMTEELLGFTLSKEHSAVDWSQRPLPVDWLNYAALDVEVLVQ
LRWATEERLARAGKLDWALEEFEHVRTAPPPAPRQDPWRRTHGLGNVRGRRKLTAVRNLW
LARESLAEHKDLAPTRLLPDSAIIAAANAMPRTVPQLMSTPGFHGRLASREAPRWLAAVQ
EARLTEEPVPATIPSTALPPVKGWETKRPEASARLKVLKPAVAALAEELELPTENLLTPE
HLRRFCWQPPRSTSDDAVAERLRELGARSWQVERVAPVIGAEWRALRARRRADKAGEPQD
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
gtggtgcccggtttcgagcacctcgcgatccccgcgaccgtgcacctcaacggcccggcc
gagggactgccccgcgtggtggacaccgcccgggggctcagccgtgccgccgagcagctc
gcggcggcccacgggcccgtggccgtggacaccgagcgcgcctcgggcttccgctacggc
cagcgcgccttcctggtacagctgcggcgcgagggtgccgggaccgtgctgatcgacccg
gaggccgtgggctccctggccgaggtggacgaggccctgcgcggtgtggagtgggtgctg
cacgcggccacgcaggacatgccgtgcctcgcggagctcgacatgcaccccgacgagctg
ttcgacaccgagctgggcggacggctgctggggctgcgcaaggtggggctcgcgtccatg
accgaggagctgctggggttcacgctgtccaaggagcactccgccgtggactggtcccag
cggcccctgccagtggactggctcaactacgccgcgctggacgtggaggtgctcgtgcag
ctgcgctgggccacggaggagcgcctcgcgcgggccggcaagctggactgggcgctcgag
gagttcgagcacgtgcgcaccgcgcccccgcccgcgccccggcaggacccgtggcggcgc
acgcacgggctcggcaacgtgcgcggtcggcgcaagctcaccgcggtgcgcaacctgtgg
ctcgcgcgggagtccctcgccgagcacaaggacctcgcccccacgcgcctgctgccggac
tccgcgatcatcgccgcggccaacgcgatgccacgcaccgtgccccagctcatgtccacc
cccggcttccacggccggctcgcctcccgcgaggctccgcgctggctcgccgccgtgcag
gaggcccgcctcacggaggagcccgtgcccgccacgatcccctccacggcgctgcccccg
gtcaagggctgggagaccaagcgccctgaggcctccgcccggctcaaggtgctgaaaccg
gcggtcgcggccctcgcggaggagctggagctgcccacggagaacctgctcacacccgag
cacctgcgccgcttctgctggcagcccccgcgctccacgtccgacgacgccgtggccgag
cggctgcgcgagctcggggcccgctcgtggcaggtggagcgggtcgcccccgtgatcggt
gccgagtggcgggccctgcgcgcccgccgccgcgcggacaaggccggcgagccccaggac
tga
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