Kocuria rhizophila: KRH_14710
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Entry
KRH_14710 CDS
T00701
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
krh
Kocuria rhizophila
Pathway
krh03030
DNA replication
krh03430
Mismatch repair
krh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KRH_14710 (dnaE)
03430 Mismatch repair
KRH_14710 (dnaE)
03440 Homologous recombination
KRH_14710 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
krh03032
]
KRH_14710 (dnaE)
03400 DNA repair and recombination proteins [BR:
krh03400
]
KRH_14710 (dnaE)
Enzymes [BR:
krh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KRH_14710 (dnaE)
DNA replication proteins [BR:
krh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KRH_14710 (dnaE)
DNA repair and recombination proteins [BR:
krh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KRH_14710 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
BAG29818
UniProt:
B2GJN7
LinkDB
All DBs
Position
complement(1661896..1665450)
Genome browser
AA seq
1184 aa
AA seq
DB search
MTSATGKKGFTHLHVHTEYSMLDGAARLNDLFEECHRLGMDSLATTDHGFVFGAFDFWNK
ARAAGIKPIIGVEAYLTPGTARQDRTRVKFADGGRDDVSGAGAYTHMTLLAQSSEGMQNL
FRASTKASLEGQLYKPRMDRELLNQYGKGLIATTGCPSGEVQTRLRLGQYDEAVKAAAEF
RDIFGAENFYCELMDHGLGIEKRVTQDLLRLAKELNLPLVATNDLHYTHAEDAKSHAALL
CVQSGSTLQDPKRFKFDADEFYLKSPEQMRELFRDFPDACDNTLEIAERCEVEFDTSANY
MPRFPTPEGEDETSWFIKEVEKGLHYRFPEGIPDDVREQAEYEKKIIIQMGFPGYFLVVA
DFINWSKDNGIRVGPGRGSGAGSMVAYAMRITELNPLAHGLIFERFLNPDRVSMPDFDVD
FDDRRRSEVIHYVTEKYGDERVAMIVTYGTIKAKQALKDSSRVLGYPFSMGERLTKAMPP
DVMGKGISLQDVYDKDAKRYDEAGELREVLEDDPESMKVFETAQGLEGLKRQWGVHAAGV
IMSSDPLIDIIPLMRREQDGQVITQFDYPTCEGLGLIKMDFLGLRNLTIISDALENIALN
RDGFVLDLEHLPIDDPGSYELLARGDTLGVFQLDGGPMRQLLKLMRPDNFEDISATIALY
RPGPMGANSHTNYALRKNGAQEITPIHPELAEPLEDILGTTYGLIVYQEQVMAIAQKVAG
YSLGQADILRRAMGKKKKAELDKQYQGFHQGMVDRGYSEAAIKALWDILLPFSDYAFNKA
HSAAYGLVSYWTAYLKAHYPAEYMAALLTSVGDDKDKLAMYLTECRHMGITVLPPDVNES
ELNFTPVGTDIRFGMGAVRNVGANVVQAMVDARNEQGKFTSFNDFLAKVPAVVCNKRTIE
SMIKAGAFDQLGHTRRSLVMCHEQAVEDVVAQKKKEDNGEFTFDIFSMGGSEDDEQETFS
VEVPDVPEWERKDLLAFEREMLGLYVSDHPLRGLDDALGQYTDTAIAPLLTEENTRPDGA
VVTIGGMITSLSRRIAKSSGNAYARVELEDRSGSIEVMFFGKAYAPIAGVLAEDLICVIK
GRMQRRDDGSITISAQELTVPELSVDGSSGPVCVALPEHRATEATIRQIGEVLRNHRGDS
EVRIHLDTRRSIQVMRLGPEYRVNPSPALFGDLKVLLGPACLEA
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
gtgacttcggcgaccggcaaaaaaggcttcacccatctccacgtgcacaccgagtactcc
atgctggacggtgccgcgcgcctgaacgacctcttcgaggagtgccaccggctgggcatg
gactccctggccaccacggaccacgggttcgtgttcggggctttcgacttttggaacaag
gcccgcgcggccgggatcaaaccgatcatcggcgtggaggcctatctcacgccgggcacg
gctcgccaggaccgcacgcgcgtgaagttcgcggacggcgggcgggacgacgtctccggt
gccggcgcctacacccacatgaccctgctcgcgcagtccagcgagggcatgcagaacctc
ttccgcgcctccaccaaggcgtccctggagggtcagctgtacaagccccgcatggaccgg
gagctgctgaaccagtacggcaaggggctcatcgccaccacgggctgcccgtccggggag
gtgcagacccggctacggctgggccagtacgacgaggccgtgaaggccgcggcggagttc
cgcgacatcttcggcgcggagaacttctactgcgagctcatggaccacgggctgggcatc
gagaagcgcgtgacccaggacctgctgcgcctggccaaggagctcaacctgcccctggtg
gccaccaacgacctgcactacacccacgcggaggacgccaagtcccacgcggcgctgctg
tgcgtgcagtccggctccaccctgcaggaccccaagcgcttcaagttcgacgcggacgag
ttctacctcaaatcccccgagcagatgcgcgagctgttccgggacttcccggacgcgtgc
gacaacaccctggagatcgccgagcgctgcgaggtggagttcgacacctccgccaactac
atgccgcgcttccccacgcccgagggggaggacgagacctcgtggttcatcaaggaggtg
gagaaggggctgcactaccgcttcccggaggggatcccggacgacgtccgcgagcaggcg
gagtacgagaagaagatcatcatccagatgggcttccccggctacttcctggtggtcgcc
gacttcatcaactggtccaaggacaacggcatccgcgtgggcccgggccgtggttccggt
gccggttccatggtggcgtacgccatgcgcatcacggagctgaaccccctggcgcacggg
ctgatcttcgagcgcttcctcaacccggaccgcgtgtccatgcccgacttcgacgtggac
ttcgacgaccgccgccgctccgaggtgatccactacgtcacggagaagtacggggacgag
cgcgtggccatgatcgtcacgtacggcaccatcaaggccaagcaggcgctgaaggactcc
tcgcgcgtgctgggctacccgttctccatgggggagcggctcaccaaggccatgccgccg
gacgtcatgggcaagggcatctccctgcaggacgtctacgacaaggacgccaagcgctac
gacgaggccggcgagctgcgcgaggtcctcgaggacgaccccgagtccatgaaggtcttc
gagacggcgcagggcctggaggggctcaagcgccagtggggtgtccacgccgcgggcgtg
atcatgtcctcggacccgctgatcgacatcatcccgctcatgcgccgcgagcaggacggg
caggtgatcacccagttcgactaccccacgtgcgagggcctggggctgatcaagatggac
ttcctggggctgcgcaacctcacgatcatctccgacgccctggagaacatcgccctcaac
cgggacggcttcgtgctggacctggagcacctgcccatcgacgaccccggctcctacgag
ctgctggcccgcggggacaccctgggcgtgttccagctggacggcgggcccatgcgccag
ctgctcaagctcatgcgccccgacaacttcgaggacatctccgcgaccatcgccctgtac
cggccgggccccatgggcgcgaactcccacaccaactacgcgctgcgcaagaacggtgca
caggagatcacccccatccaccccgagctggccgagccgctcgaggacatcctgggcacc
acgtacgggctgatcgtgtaccaggagcaggtgatggcgatcgcccagaaggtcgcgggc
tactcgctgggccaggcggacatcctgcgccgcgccatgggcaagaagaagaaggccgag
ctggacaagcagtaccagggcttccaccagggcatggtggaccgtggctactcggaggcc
gcgatcaaggccctgtgggacatcctgctgccgttctcggactacgcgttcaacaaggcg
cactccgccgcgtacggtctggtctcctactggaccgcgtacctcaaagcgcactacccg
gccgagtacatggcggcgctgctcacctcggtgggcgacgacaaggacaagctggccatg
tacctcaccgagtgccgccacatgggcatcacggtgctgccgccggacgtcaacgagtcg
gagctgaacttcacccctgtgggcacggacatccgcttcggcatgggagcggtgcgcaac
gtgggcgccaacgtggtccaggccatggtggacgctcgcaacgagcaggggaagttcacg
tccttcaacgacttcctggccaaggtcccggcggtggtctgcaacaagcgcaccatcgag
tccatgatcaaggccggcgcgttcgaccagctcgggcacacgcgccgcagcctggtgatg
tgccacgagcaggccgtcgaggacgtcgtggcgcagaagaagaaggaggacaacggcgag
ttcacgttcgacatcttctcgatgggcggttccgaggacgacgagcaggagacgttctcc
gtggaggtcccggacgtccccgagtgggagcgcaaggacctgctcgccttcgagcgcgag
atgctgggcctctacgtctcggaccacccgctgcgcggtctcgacgacgccctgggccag
tacacggacacggccatcgcgccgctgctcaccgaggagaacacgcggcccgacggcgcc
gtggtcaccatcggcggcatgatcacctccctgtcccgcaggatcgcgaagtcctccggc
aacgcctacgcccgggtggagctcgaggaccgctcgggctcgatcgaggtgatgttcttc
ggcaaggcgtacgcgccgatcgcgggggtgctcgcggaggacctgatctgcgtgatcaag
ggacgcatgcagcgccgcgacgacggctcgatcaccatctctgcgcaggagctcacggtg
cccgagctgagcgtggacggctcgtcggggccggtgtgcgtggccctgcccgagcaccgc
gccacggaggccaccatccgtcagatcggggaggtgctgcgcaaccacaggggcgattcc
gaggtgcggatccacctggacacccggcgcagcatccaggtgatgcggctgggcccggag
taccgggtgaacccgtcacccgcgctgttcggagacctcaaggtgctgctggggcccgcc
tgcctggaggcctga
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