Kocuria rhizophila: KRH_15230
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Entry
KRH_15230 CDS
T00701
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
krh
Kocuria rhizophila
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
krh03009
]
KRH_15230
Enzymes [BR:
krh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
KRH_15230
Ribosome biogenesis [BR:
krh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KRH_15230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
CFAP143
Motif
Other DBs
NCBI-ProteinID:
BAG29870
UniProt:
B2GK25
LinkDB
All DBs
Position
complement(1722327..1723433)
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AA seq
368 aa
AA seq
DB search
MASPHGNASRGGGARGPQGRGKGSKAGPKGGFRSGPGSKGSGGAAGGRGYSKGSAAKGPG
AARGKGPAGKGPGRPKAGAAQKGPQKPRAFAGVDKYERRASAIKEHGPHRRRRPKNPPVD
RLEVHDENGVRLQKLMAQAGVASRRVCEEMIQDGRVSVDGEIVTELGVRVDPALQAVHVD
GMRIQTDEKLVYYAFNKPAGVVSTMEDPDGRRCVSDFLDPRKHQRVFHVGRLDVETEGLL
LLTNDGELTNRLTHPSYEVPKTYLVQVHGPVEKGIGNQMKQGIRLEDGIAKVDDFRLVDS
TPGHVLIEVVLHSGRNRIVRRMFDAVDHPVEKLARTHVGPIAIGDQKQGTVRKLSHTEVG
NLLASVGM
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaccacacggcaacgcatcccgcggcggaggcgcccgcggaccccagggccgg
ggcaagggctccaaggcgggccccaagggcggcttccgctccggccccggttcgaagggc
tccggcggcgccgccgggggccgcggctactccaagggttcagctgcgaagggcccgggc
gccgctcgcggcaagggccccgcgggcaaggggccgggcaggcccaaggccggtgccgcc
cagaagggtccgcagaagccccgcgcgttcgcgggcgtggacaagtacgagcgccgcgcc
tcggcgatcaaggagcacggcccacaccgtcgtcgtcgtccgaagaacccgcccgtggac
cggctggaggtccacgacgagaacggcgtgcggctgcagaagctcatggcgcaggccggt
gtggccagccgccgcgtgtgcgaggagatgatccaggacgggcgcgtgagcgtggacggg
gagatcgtcacggagctcggtgtccgcgtggaccccgcgctgcaggccgtccacgtggac
ggcatgcgcatccagacggacgagaagctcgtgtactacgcgttcaacaagccggcaggc
gtggtctccaccatggaggacccggacgggcgccgctgcgtgagcgacttcctggacccc
cgcaagcaccagcgcgtgttccacgtgggccgcctggacgtggagaccgagggtctgctg
ctgctcaccaacgacggcgagctgaccaaccggctcacgcacccctcctacgaggtgccc
aagacctacctggtgcaggtgcacggtcccgtggagaagggcatcggcaaccagatgaag
cagggcatccgcctggaggacggcatcgccaaggtggacgacttccgtctggtggactcc
accccgggccacgtgctcatcgaggtggtgctgcactccgggcgcaaccggatcgtgcgg
cgcatgttcgacgccgtggaccacccggtggagaagctcgcgcgcacccacgtgggcccc
attgcgatcggggaccagaagcagggcacggtgcgcaagctctcgcacaccgaggtgggc
aacctgctcgcgtccgtggggatgtga
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integrated database retrieval system
