Kocuria rhizophila: KRH_15800
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Entry
KRH_15800 CDS
T00701
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
krh
Kocuria rhizophila
Pathway
krh00300
Lysine biosynthesis
krh00470
D-Amino acid metabolism
krh01100
Metabolic pathways
krh01110
Biosynthesis of secondary metabolites
krh01120
Microbial metabolism in diverse environments
krh01230
Biosynthesis of amino acids
Module
krh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KRH_15800 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KRH_15800 (dapF)
Enzymes [BR:
krh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KRH_15800 (dapF)
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Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
BAG29927
UniProt:
B2GKG8
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All DBs
Position
complement(1793887..1794780)
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AA seq
297 aa
AA seq
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MGVRVNKAHGTGNDFVVFTDRDGSLDVPPETVAAVCDRHLGLGGDGLIRAVRSRDLEEGR
RLLERHPDAEWFMDYRNADGSVAQMCGNGVRVFVDHLVREGLVTLPRGARLRIGTRAGVR
TVARTSGGYAVDMGPWSFTRGELARERGSDCVVTAAGLTVPRPGVSIGMGNPHTVVVLSE
GEKLDTLDLHTAPAVDPVPVDGTNVEFVVPLEHDDTDLGRLEMRVHERGVGETHSCGTGA
CAAAAATRFWGGPQSPDRWFVQVPGGVLSVTFVPAPDGTEHVVLAGPVRVVATAELV
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgtgcgggtgaacaaggcgcacggcacgggcaacgacttcgtggtcttcacggac
cgggacggcagcctggacgtccctccggagaccgtggccgccgtgtgcgaccgccacctg
ggtctgggcggggacggcctcatccgggctgtgcgctcccgggacctggaggaggggcgg
cggttgctcgagcgccacccggacgccgagtggttcatggactaccgcaacgcggacggc
tccgtggcccagatgtgcggcaacggggtccgggtgttcgtggaccacctggtgcgcgag
ggtctcgtcacgctgccgcggggggcgaggctgcgcatcggcacccgggcgggggtgcgc
acggtggcccgcacgtcgggcggctacgcggtggacatgggcccgtggagcttcacccgc
ggggagctcgcccgtgagcgcggttcggactgcgtggtcaccgcggccgggctcacggtg
ccccgcccgggggtctcgatcggcatgggcaatccccacaccgtggtggtgctctccgag
ggggagaagctcgacaccctggacctgcacacggctcccgcggtggaccccgtccccgtt
gacggcaccaatgtggagttcgtggtgcctctcgagcacgacgacaccgacctcgggcgc
ctcgagatgcgcgtgcacgagcgcggcgtgggggagacccactcgtgcggcacgggggcg
tgcgcggccgcggcggccacgaggttctggggcggtccgcagtcaccggaccgctggttc
gtccaggtccccggcggggtcctctccgtcacgttcgtgcccgccccggacggcacggag
cacgtggtgctcgcgggtcccgtgcgggtcgtggcgaccgccgagctggtctag
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