Kocuria rhizophila: KRH_15820
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Entry
KRH_15820 CDS
T00701
Name
(GenBank) putative tRNA-thiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
krh
Kocuria rhizophila
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
krh03016
]
KRH_15820
Enzymes [BR:
krh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
KRH_15820
Transfer RNA biogenesis [BR:
krh03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
KRH_15820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
Motif
Other DBs
NCBI-ProteinID:
BAG29929
UniProt:
B2GKH0
LinkDB
All DBs
Position
complement(1795790..1797331)
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AA seq
513 aa
AA seq
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MPHTAPDPSPLNATGAVTVPREGQGAPAYEVRTLGCQMNAHDSERITGLLENAGYVPAVG
REPDLVVFNTCAVRENADNKLYGQLGQLAPVKRRNDRLQIAVGGCLAQKDRSTIVEKAPW
VDVVFGTHNIGSLPVLLERARHNQQAQVEILESLETFPSALPTKREQAYAGWVSISVGCN
NTCTFCIVPQLRGKEKDRRPGDILAEVRALVDSGAVEVTLLGQNVNSYGVEFGDRGAFAK
LLRACGEIEGLERIRFTSPHPAAFTDDVIDAMAETPNVMPQLHMPLQSGSDRILKRMRRS
YRSTRFLGILDRVRDRIPDAAITTDIIVGFPGETEQDFQDTLDVVAASEFSSAFTFQYSI
RPGTPAGEMADQVPAAVVQERFERLTALQDGISARLNRQLVGTRAEVLVSAQSGRKSEST
HRLSGRSRDQRLVHFTVPDGAVAPRPGDVVSVPVTGAASYHLLADPADASQYALRRSRGG
DAWEAAQAESCAAPSSAGSPQAVGLGMPTLRKS
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgccccacaccgcaccggaccccagccccctgaacgccacgggcgccgtgaccgtgccc
cgcgagggacagggtgcgcccgcctacgaggtgcgcacgctgggctgccagatgaacgcc
cacgactccgagcggatcacgggcctgctcgagaacgcgggctacgtgcccgcggtgggg
cgggagccggacctcgtggtgttcaacacgtgcgccgtgcgggagaacgcggacaacaag
ctctacgggcagctgggtcagctcgctccggtcaagcgccgcaacgaccgcctgcagatc
gccgtgggcgggtgcctcgcgcagaaggaccgctccaccatcgtggagaaggccccgtgg
gtggacgtcgtcttcggaacccacaacatcggctccctgcccgtgctgctggagcgggcg
cgccacaaccagcaggctcaggtggagatcctcgagtccctcgagacgttcccctccgcc
ctgcccaccaaacgtgagcaggcctatgcggggtgggtgtccatctcggtggggtgcaac
aacacgtgcacgttctgcatcgtcccgcagctgcgcggcaaggagaaggaccggcgcccg
ggggacatcctggccgaggtgcgcgcgctcgtggactccggtgcggtggaggtcaccctg
ctcgggcagaacgtgaactcctacggtgtggagttcggcgaccgcggtgccttcgccaag
ctgctgcgcgcgtgcggggagatcgagggcctggaacggatccggttcacgagccctcac
cccgcggcgttcacggacgacgtgatcgacgcgatggccgagacccccaatgtaatgccc
cagttgcacatgcccctgcagtcgggctcggacaggatcctcaagcggatgcgccgctcc
taccggtccaccaggtttctgggcatcctggaccgcgtgcgggaccgcatcccggacgcc
gccatcaccacggacatcatcgtgggcttccctggggagacggagcaggacttccaggac
accctggacgtcgtggcggcctcggagttctcctcggccttcacgttccagtactccatc
cggccgggcacgcccgcgggggagatggcggaccaggtgccggcggccgtggtccaggaa
cgtttcgagcgcctcaccgctctccaggacggcatcagtgcccggctcaaccggcagctc
gtcggcacgcgggccgaggtgctcgtcagcgcccagtcggggcgcaagtccgagtccacg
caccggctctcggggcgcagccgggaccagcgcctcgtccacttcacggttcccgacggc
gccgtggcgcctcgcccgggcgacgtcgtctccgtaccggtcaccggcgcggcgtcgtac
cacctgctcgcggaccccgcggacgcctcccagtacgcgctgcgccggtcccgcggcggg
gacgcgtgggaggccgcgcaagcggagtcgtgcgccgcgccgtcgtccgccggctccccg
caggccgtggggctcggcatgcccaccctgcggaagtcctga
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