Kocuria rhizophila: KRH_16020
Help
Entry
KRH_16020 CDS
T00701
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
krh
Kocuria rhizophila
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
krh03016
]
KRH_16020 (truB)
Enzymes [BR:
krh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KRH_16020 (truB)
Transfer RNA biogenesis [BR:
krh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KRH_16020 (truB)
Prokaryotic type
KRH_16020 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
ADH_zinc_N
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BAG29949
UniProt:
B2GKJ0
LinkDB
All DBs
Position
complement(1817224..1818363)
Genome browser
AA seq
379 aa
AA seq
DB search
MNARQDVPSPAPSLPRVAGLVVVDKPLGWTSHDVVARMRRLAGTRKVGHAGTLDPAASGV
LVIGVEKATKLLTWVTGTDKTYRAGIRLGAATVTDDAEGDVTRTAPPERLAGTTDEQVLA
AVAQLTGEIQQVPSAVSAIKVDGKRSYARVRGGEDVTLPARPVTVSEFAVHGIRRVEAAD
GQAFIDVDATVTCSSGTYVRALARDLGEALGVGGHLTALRRTRVGTFTLDQAHTLEELTE
QVRSGATVPTLGIAAAARQLFPVRELTAAEATDLSHGRRIGPHGTAGNDAAAEPARGRTV
ACFAPDGTLVALAEDRGGAGQRYATSVLGIAAGVTFSPAAAEAGGAQSRASRDAAATQPG
SADAAPTDTYTTHGERAHD
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcacgacaggacgtcccgagcccggccccctccctgccgagggtggccgggctc
gtcgtcgtggacaagcccctggggtggacctcccacgacgtcgtcgcccgcatgcgccgg
ctcgccggcacccgcaaggtggggcacgccggcaccctggacccggcggcgtcgggtgtg
ctggtgatcggggtggagaaggccaccaagctgctcacctgggtgaccggcacggacaag
acgtaccgcgccgggatccgcctgggagcggccaccgtgaccgacgacgccgagggcgac
gtcacgcgcacggccccgcccgagcggctggccgggaccaccgacgagcaggttctcgcc
gcggtcgcgcagctcaccggtgagatccagcaggtgccctcggccgtgagtgccatcaag
gtggacggcaagcgctcctacgcccgcgtgcgcggcggcgaggacgtcacgctcccggcc
cggcccgtgaccgtgagcgagttcgcggtgcacgggatccggcgggtcgaggcggcggac
ggccaggccttcatcgacgtggacgcgaccgtgacgtgctcgtccggtacctacgtgcgt
gccctggcccgggacctcggggaggcgctcggcgtgggcgggcacctcacggccctgcgc
cgcacgcgcgtgggcaccttcaccctggaccaggcccacacgctcgaggagctcacggag
caggtgcgttccggcgccaccgtgcccaccctgggcatcgccgccgccgcccggcagctg
ttcccggtgcgcgagctcaccgccgcggaggccacggacctctcccacggacgacgcatc
gggccgcacggcacggccgggaacgacgccgccgcggagcccgcgcgcgggcgcaccgtg
gcgtgcttcgccccggacgggacgctcgtggccctcgcggaggaccgcggcggcgcgggg
cagcgctacgcgacgtccgtgctgggcatcgccgccggcgtcacgttctccccggccgcc
gcggaggccggcggggcccagtcacgggcttcccgcgacgcggcagccacgcagccgggc
agcgcagacgccgcacccaccgacacgtacacgacacacggagagcgggcacacgactga
DBGET
integrated database retrieval system
