Kocuria rhizophila: KRH_17040
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Entry
KRH_17040 CDS
T00701
Symbol
rmlC
Name
(GenBank) putative dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
krh
Kocuria rhizophila
Pathway
krh00521
Streptomycin biosynthesis
krh00523
Polyketide sugar unit biosynthesis
krh00541
Biosynthesis of various nucleotide sugars
krh01100
Metabolic pathways
krh01110
Biosynthesis of secondary metabolites
krh01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KRH_17040 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KRH_17040 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KRH_17040 (rmlC)
Enzymes [BR:
krh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
KRH_17040 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
RmlD_sub_bind
Epimerase
Motif
Other DBs
NCBI-ProteinID:
BAG30051
UniProt:
B2GL95
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All DBs
Position
complement(1929891..1930871)
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AA seq
326 aa
AA seq
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MHTTAIDGLLLVDVPVHGDNRGWFTDNWQRAKAVAAGLPDASFVQNNISFNGSRRTTRGI
HAEPWDKYVSVATGRIFGACVDLREGPGFGTVVTHEITPGTAVFVPRGVGNAFQTLEEAT
AYTYLVTDHWRADATAEYSFVNLGDPQLGIEWPVPLAQAELADKDRAHPALDDVEPLAPA
PLLVLGARGQVGLALTARLSTTGVPFTAWTREELDLANPASWPAEISSAYTRTTPWRRCP
CTAAEARGGDRTAGLPASLRDPHQLGDRGGDELRGHHGAAGRAGGGPLRGRAPARAPHRR
GGPGGGSPAPRGLRRPVRHVPPHRLR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
gtgcacaccaccgccatcgacgggctgctgctggtggacgtgcccgtccacggggacaac
cgcggctggttcacggataactggcagcgcgccaaggccgtggccgccgggctgccggac
gcctccttcgtgcagaacaacatctcgttcaacggctcccgccgcaccacgcgcggcatc
cacgccgagccgtgggacaagtacgtctccgtggccaccggccggatcttcggcgcgtgc
gtggacctgcgggaggggccgggcttcggcaccgtggtcacgcacgagatcaccccgggc
accgcggtgttcgtgccgcgcggggtgggcaacgcgttccagacactggaggaggccacc
gcctacacctacctggtcacggaccactggcgcgcggacgccacggccgagtactcgttc
gtgaacctgggggacccgcagctgggcatcgagtggcccgtgccgctggcgcaggcggag
ctcgcggacaaggaccgcgcgcaccccgcgctggacgacgtcgagccgctggctcccgcg
ccgttgctcgtgctgggtgcccgcggccaggtgggcctggccctcacggcgcggctgtcg
acgacgggggttccgttcaccgcatggacccgggaggagctggacctcgcgaacccggcc
tcctggcccgcggagatcagctcggcgtacaccaggaccaccccgtggcgccgctgtccg
tgtacggcagccgaagcccgcgggggagaccgcactgcgggcctgcccgcgtcactacgt
gatccgcaccagctgggtgatcggggaggggatgaacttcgtggccaccatggcgcggct
ggccgagcagggggtgggcccctccgtggtcgcgcaccagcacgggcgcctcaccgccgc
ggcggacctggcggcgggagtcccgcacctcgtggactccggcgccccgtacggcacgta
ccacctcaccggctccggtga
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