Kocuria rhizophila: KRH_18200
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Entry
KRH_18200 CDS
T00701
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
krh
Kocuria rhizophila
Pathway
krh03420
Nucleotide excision repair
krh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KRH_18200 (uvrD1)
03430 Mismatch repair
KRH_18200 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
krh03400
]
KRH_18200 (uvrD1)
Enzymes [BR:
krh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KRH_18200 (uvrD1)
DNA repair and recombination proteins [BR:
krh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KRH_18200 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
KRH_18200 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
Viral_helicase1
AAA_30
AAA_22
ResIII
DUF6761
Motif
Other DBs
NCBI-ProteinID:
BAG30167
UniProt:
B2GM51
LinkDB
All DBs
Position
complement(2071800..2074256)
Genome browser
AA seq
818 aa
AA seq
DB search
MDYLSDNPLLSAASVRSSTAGAPHEPSDAVASPEQLVAGLNEPQRAAVEHSGAPLLIVAG
AGSGKTRVLTHRIAHLLATGRARRGEILAITFTNKAAAEMRERIAELVGDSARTMWISTF
HSLCVRILRREAKTLGLNTNFSIYDSADSLRLITQVAKQHELDPKRFAPKAIQHRISALK
NELVDDETCLARASSTDPFESAVAQVYRGYTQRLRAANAMDFDDLIGETVHMFRAFPQVL
EYYRRRFRHVLVDEYQDTNHAQYALVRELVGGDSPGHTDESGIPPAELTVVGDSDQSIYA
FRGADIRNITDFERDFPAARTIMLEQNYRSTQNILSAANAVISQNADRRDKKLWTAEGDG
APIVGYAAENEHEEARFIAEEIDRLQDEHGIRPGDVAVFYRTNAQSRSLEEILMRVGLPY
KVVGGTRFYERKEIKDAMSYLRAIANPADDITVRRIVNEPKRGIGDRAQGSIAALADREG
ISFSEAMHRLDEAPGLATRSANAIRTFAQLMDDLGELAQGASVTAVLEAVLEQSGYLEAL
RTSTDPQDESRVENLAELVAVVREFEKDRPEAGLGEFLEHVALVADADQIPSRPDTAAEG
TASAQQIAQEVEEARDQGVVTLMTLHTAKGLEFPVVFLTGMEHGIFPHQRSFADPSSMEE
ERRLAYVGITRARQRLYITRAESRSLWGQSQFNPASPFLDEIPAHLIDWKREGAAASGGW
GSPVHAGSGGGTRDPLRGSSWGAGAGSGATFRRLSPSRVEPNREIPSLSVGDAVEHKAFG
RGSVVALEGSGDKTVAKVRFGAEEKRLLLRYAPMTKVS
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggactacctctctgacaacccactgctctccgccgcctcggtgcgatcctcgaccgcc
ggggccccgcacgagccgtccgacgccgtcgcgtccccggagcagctcgtggcggggctc
aacgagccccagcgcgccgcggtcgagcactcgggggcgcccctgctcatcgtcgctggc
gcgggctcgggcaagaccagggtgctgacccaccggatcgcccacctgctggccaccggc
cgggcacggcgcggggagatcctcgccatcacgttcaccaacaaggccgccgcggagatg
cgcgagcggatcgccgagctggtgggggactccgcccgcaccatgtggatctccacgttc
cactccctgtgcgtgcggatcctgcgccgggaggccaagaccctggggctgaacaccaac
ttctccatctacgactccgcagactcgctgcggctgatcacccaggtggccaagcagcac
gagctggacccgaagcgcttcgcccccaaagccatccagcacaggatctcggcgctgaag
aacgagctcgtggacgacgagacctgcctggcccgggcgagctccacggacccgttcgag
tccgccgtggcccaggtgtaccgcgggtacacccagcggctgcgggcggccaacgccatg
gacttcgacgacctcatcggcgagaccgtccacatgttccgggcctttccccaggtgctg
gagtactaccgccggcgcttccgccacgtgctcgtggacgagtaccaggacaccaaccac
gcccagtacgcactggtgcgcgagctcgtgggcggggactcgcccggtcacacggacgag
tccgggatccccccggccgagctcacggtggtgggggactcggaccagtccatctacgcg
ttccgcggggcggacatccgcaacatcacggacttcgagcgggacttcccggccgcgcgc
accatcatgctggagcagaactaccgctccacgcagaacatcctctccgcggccaacgcg
gtgatctcccagaacgcggaccgccgggacaagaagctgtggaccgccgagggggacggt
gcccccatcgtgggctacgccgcggagaacgagcacgaggaggcccggttcatcgcggag
gagatcgacaggctccaggacgagcacgggatccgccccggggacgtggccgtgttctac
cgcaccaacgcccagtcgcgctccctcgaggagatcctgatgcgcgtggggctgccctac
aaggtggtgggcggcacgcggttctacgagcgcaaggagatcaaagacgccatgtcctac
ctgcgcgcgatcgccaacccagcggacgacatcacggtgcgacgcatcgtcaacgagccc
aagcgcgggatcggggaccgcgcccaggggtccatcgcggcgctcgcggaccgtgagggc
atctcgttctccgaggcgatgcaccgcctggacgaggcgccggggctcgccacgcgctcc
gccaacgcgatccgcacgttcgcccagctcatggacgacctgggcgagctcgcccagggt
gcgtccgtgaccgcggtgctcgaggccgtgctggagcagtccggctacctggaggccctg
cgcacctccacggacccgcaggacgagtcccgcgtggagaacctggcggagctcgtggcc
gtggtgcgcgagttcgagaaggaccgcccggaggccggcctgggggagttcctggagcac
gtggccctcgtggcggacgcggaccagatcccctcgcgcccggacaccgccgctgagggc
acggcgagcgcccagcagatcgcccaggaggtcgaggaagcccgcgaccagggggtcgtg
accctcatgacgcttcacaccgccaagggcctggagttcccggtggtgttcctcaccggc
atggagcacgggatcttcccgcaccagcgcagcttcgcggacccctccagcatggaggag
gagcggcggctcgcgtacgtgggcatcactcgggcccggcagcggctctacatcacccgc
gcggagtcccgctccctgtggggccagtcccagttcaacccggccagtccgttcctggac
gagatccccgcgcacctcatcgactggaagcgcgagggcgcggccgcgtccggcggctgg
ggctcgcccgtccacgcgggctccgggggcggaacccgcgacccgctgcggggctcctcc
tggggcgccggtgccggttccggggcaacgttccgcaggctctcgccctcgcgggtggag
ccgaaccgggagatcccctcgctcagcgtgggggacgccgtggagcacaaggccttcggc
cgcggatcggtggtcgcgctcgagggcagcggggacaagaccgtggcgaaggtgcgcttc
ggcgcggaggagaagcggctgctgctgcgctacgcgcccatgaccaaggtctcctga
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