Kocuria rhizophila: KRH_18370
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Entry
KRH_18370 CDS
T00701
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
krh
Kocuria rhizophila
Pathway
krh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KRH_18370 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
krh03019
]
KRH_18370 (groEL)
03110 Chaperones and folding catalysts [BR:
krh03110
]
KRH_18370 (groEL)
03029 Mitochondrial biogenesis [BR:
krh03029
]
KRH_18370 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
krh04147
]
KRH_18370 (groEL)
Enzymes [BR:
krh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
KRH_18370 (groEL)
Messenger RNA biogenesis [BR:
krh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
KRH_18370 (groEL)
Chaperones and folding catalysts [BR:
krh03110
]
Heat shock proteins
HSP60 / Chaperonin
KRH_18370 (groEL)
Mitochondrial biogenesis [BR:
krh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
KRH_18370 (groEL)
Exosome [BR:
krh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KRH_18370 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
KRH_18370 (groEL)
Exosomal proteins of breast cancer cells
KRH_18370 (groEL)
Exosomal proteins of colorectal cancer cells
KRH_18370 (groEL)
Exosomal proteins of bladder cancer cells
KRH_18370 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
BAG30184
UniProt:
B2GFP6
LinkDB
All DBs
Position
complement(2089249..2090883)
Genome browser
AA seq
544 aa
AA seq
DB search
MAKMIAFDEEARRGLEKGLNTLADAVKVTLGPRGRNVVLEKSWGAPTITNDGVSIAKEIE
LEEPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGADPLSLKRGIE
KAVASVTEQLLSSAKEIETEEEIAATASISAADPEIGKLIAEAMEKVGKEGVITVEESNT
FGLDLELTEGMRFDKGYLSGYFVTDADRQEAVLEDPYILIVNSKISAVKDLVPVLEKVMQ
AGKPLLIIAEDVDGEALAMLVLNKMRGAVKSVAVKAPGFGDRRKAQLADIAILTGGQVIT
EEVGLSLESATIDLLGQARKVVVTKDETTIVDGAGTQEEIEGRVAQIRAEINNSDSDYDR
EKLQERLAKLAGGVAVLKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
GAKVFDSLNLSGDEATGANIVKVAIDAPLKQIALNAGMEPGVVVDKVRGLETGWGLNAAT
GEYEDLMAAGINDPVKVTRSALQNAASIAGLFLTTEAVVADKPEPEAAGAGAGADPMGGM
GGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatgatcgcattcgacgaagaagctcgccgcggcctcgagaagggtctgaac
accctcgcggacgccgtcaaggtcacgctcggcccgcgcggccgcaacgtggtcctggag
aagtcctggggcgctcccaccatcaccaacgacggcgtctccatcgccaaggagatcgag
ctcgaggagccgtacgagaagatcggcgccgagctcgtcaaggaggtcgccaagaagacc
gacgacgtcgccggtgacggcaccaccacggccaccgtgctcgcccaggccctcgtgaag
gaaggcctgcgcaacgtggccgccggtgcggacccgctgtccctcaagcgcggcatcgag
aaggccgtggcctccgtgaccgagcagctgctgtcctccgccaaggagatcgagaccgag
gaggagatcgccgccaccgcgtctatctccgccgcagaccccgagatcggcaagctcatc
gccgaggccatggagaaggtcggcaaggaaggcgtcatcaccgtcgaggagtccaacacc
ttcgggctggacctcgagctgaccgagggcatgcgcttcgacaagggctacctctccggc
tacttcgtcacggacgcggaccgccaggaggccgttctggaggatccctacatcctcatc
gtgaactccaagatctccgccgtgaaggacctggtccccgtgctggagaaggtcatgcag
gccggcaagccgctgctgatcatcgccgaggacgtggacggcgaggccctggccatgctg
gtgctgaacaagatgcgaggcgccgtgaagtccgtggccgtgaaggcccccggcttcggt
gaccgccgcaaggcccagctcgccgacatcgccatcctcaccggcggtcaggtcatcacc
gaagaggtcggcctgtccctcgagtccgccacgatcgacctgctgggccaggcccgcaag
gtcgtcgtcaccaaggacgagaccaccatcgtggacggcgccggcacccaggaggagatc
gagggccgcgtggcgcagatccgcgcggagatcaacaactccgactccgactacgaccgc
gagaagctgcaggagcgcctggccaagctggctggcggcgtggcagtgctcaaggccggt
gcggccaccgaggtggagctcaaggagcgcaagcaccgcatcgaggacgccgtgcgcaac
gccaaggcagccgtggaggagggcatcgtcgccggcggtggcgtggccctcatccaggcc
ggtgccaaggtcttcgactccctgaacctctcgggtgacgaggccaccggtgcgaacatc
gtcaaggtcgccatcgacgccccgctcaagcagatcgccctcaacgcgggcatggagccc
ggcgtggtggtcgacaaggtgcgcgggctcgagaccggctggggcctcaacgccgccacc
ggcgagtacgaggacctcatggccgcgggcatcaacgaccccgtcaaggtgacccgttcc
gcgctgcagaacgcggcgtcgatcgccgggctgttcctcaccacggaggccgtggtggcg
gacaagcccgagcccgaggccgccggtgcgggcgcgggtgccgatcccatgggtggcatg
ggcggcatgatgtga
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