Kocuria rhizophila: KRH_18400
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Entry
KRH_18400 CDS
T00701
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
krh
Kocuria rhizophila
Pathway
krh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KRH_18400 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
krh03400
]
KRH_18400 (ung)
Enzymes [BR:
krh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KRH_18400 (ung)
DNA repair and recombination proteins [BR:
krh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KRH_18400 (ung)
Prokaryotic type
KRH_18400 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAG30187
UniProt:
B2GFP9
LinkDB
All DBs
Position
2091775..2092458
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AA seq
227 aa
AA seq
DB search
MNAPRPLSEIMHPQWAAALEPVEPQIRAMGEFLRAEHAAGRHTLPAGENIFRAFREPLSA
VKVLIVGQDPYPTPGHAMGLSFSVAPDVRPVPRSLQNIYKELRSDLGIEPPPHGDLSSWS
GQGVMLLNRVLTVQAGAAASHRGKGWEAVSECAIRALGDRGAPLVAVLWGRDARGTAGWL
GGAPTVESAHPSPLSASRGFFGSRPFSRTNELLREQGAEPVSWELPG
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgccccgcgcccgctgtccgagatcatgcacccgcagtgggccgccgccctggaa
ccggtggagccgcagatccgtgcgatgggcgagttcctgcgcgcggagcacgccgcgggc
cggcacaccctgccggccggggagaacatcttccgggcgttccgggagccgctgtccgcg
gtcaaggtgctgatcgtgggccaggacccctaccccacgcccggacacgccatgggcctc
tcgttctcggtggccccggatgtccgaccggtcccgcggtccctacagaacatctacaag
gagctgcgctcggacctgggcatcgagcctcccccgcacggggacctctcctcgtggtcc
ggacagggggtcatgctgctcaacagggtgctcacggtgcaggcgggggcggcggcgtcc
caccggggcaagggctgggaggcggtctcggagtgcgccatccgcgcgctcggcgaccgc
ggtgcgcctctcgtggccgtcctgtggggccgggacgcccgcggcaccgcgggctggctg
ggcggggcgcccacggtggagtccgcgcacccctcgccgctgtccgcgtcccggggattc
ttcggctcccgcccgttctcgcgcaccaacgagctgctgcgcgagcagggtgcggagccc
gtctcgtgggagctgccgggttag
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