Kocuria rhizophila: KRH_21460
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Entry
KRH_21460 CDS
T00701
Symbol
soxA
Name
(GenBank) sarcosine oxidase alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
krh
Kocuria rhizophila
Pathway
krh00260
Glycine, serine and threonine metabolism
krh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KRH_21460 (soxA)
Enzymes [BR:
krh01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
KRH_21460 (soxA)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
KRH_21460 (soxA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
Pyr_redox_2
GCV_T_C
FAD_oxidored
NAD_binding_8
Pyr_redox_3
HI0933_like
Thi4
FAD_binding_2
DAO
GIDA
FAD_binding_3
AlaDh_PNT_C
Pyr_redox
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
BAG30493
NITE:
KRH_21460
UniProt:
B2GHY1
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All DBs
Position
2468240..2471152
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AA seq
970 aa
AA seq
DB search
MSASNRCPASVREGTGIDRGTELSFTVDGTQYAGHPGDTLASALLAAGHIRCGDSMYLGR
PRGIVSAGVEEPNALVTVQPRTPRDVAESMLPAPAVELTEAMVAEFVSGQGPLDPARDGA
YYDTRNVHTDVLVVGAGPAGLAAAREAARSGARVVLMDEQTRPGGSLLSRPEDVVDGVPG
WQWARQCAEELAAQPEVTVLQRTTAFGSYDSNYVVALQRRTDHLTRDPGPGVSRQRVWHV
RAAQVVLATGAHERPLVFADNDRPGIMLAGAVRTYLNRYGVTAGHRAVVTTTNDSAYDLV
ADLVAAGVEVAAVVDSRPDLTDTAQRVARETGVAVRTGSAVCGTEGSAEDGRVSAVLVTA
LDAADQPVDEPERVEADLLAVAGGWSPVVHLHSQRQGRLRWDEDLAGFVPAGAVRDQQTA
GAVNGTLDLAGCLAEGARAGAQAAQDAGFACTPRVPHTAATPITPTHPLWLVPSGPGAEQ
DWDRHFVDLQRDQTVADVLRSVGAGMRSVEHVKRYTSISTANDQGKTSAVNAIGVIAAAL
NQQDVGGFGTTTYRAPYTPVAFAALAGRRRGQLFDPARLTPVHSWHVAHGAEFEDVGQWK
RPWFYPQPGEDMDAAVLRECAAVRTSVGFMDATTLGKIEIRGTDAGEFLNRVYTNAFKKL
KPGMGRYGVMCTPDGMVFDDGVTLRLDEDRYLMTTTTGNAAAVLEWLEEWSQTEWPELDV
TFTSVTEQWTTVAVAGPRSRDVIAKLAPQLDVSQDAFPFMAFRETVLASGVPARICRISF
SGELAYEVNVSGWYGLSVWEDVFAAGEEFGITPYGTETMHVLRAEKAFPIVGQDTDGTVT
PQDLGMEWVVSKTKDFIGKRSYDRPSATDPQRKQLVAVLPTDRVTRLPEGAQLIAAGTPV
TPEQGPVPMVGHVTSAYRSAALDRTFGLALVENGRQRIGETLQAPLDGTLVDVTIAEPVI
YDPEGNRRDG
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcatcgaaccgttgtcccgcgtccgtccgtgagggcacgggcatcgaccgcggc
accgagctgtccttcaccgtggacggcacgcagtacgccggccaccccggtgacaccctc
gcgtccgcactgctggccgccgggcacatccgctgcggggactccatgtacctggggcgc
ccgcgcgggatcgtgagcgcgggggtcgaggagcccaacgccctggtcacggtccagccg
cgcacgccgcgcgacgtcgccgagtccatgctgcccgcccccgcggtggagctcaccgag
gccatggtggcggagttcgtcagcggacagggccctctggaccccgcacgggacggcgcc
tactacgacaccaggaacgtccacacggacgtgctggtggtcggcgcgggcccggcggga
ctcgccgcggcacgcgaagcggcccgttccggggcccgtgtggtgctcatggacgagcag
acgcgcccgggcggatcgctgctgagccgcccggaggacgtcgtggacggggtgcccggg
tggcagtgggcgcggcagtgcgccgaggagctcgccgcgcagcccgaggtgaccgtgctg
cagcgcaccacggccttcggcagctacgacagcaactacgtggtggccctgcagaggcgc
accgaccacctcacgcgtgatcccggtcccggggtgtcccggcagcgggtctggcacgtg
cgggcggcccaggtggtcctggccaccggcgcgcacgagcgtccgctagtgttcgcggac
aacgaccgccccgggatcatgctcgccggggccgtgcgcacctacctcaaccgctacggg
gtcaccgcgggccaccgggcggtggtcaccaccaccaacgactccgcctacgacctcgtc
gcggatctcgtggccgccggtgtggaggtggccgccgtggtggactcccgccccgacctc
acggacaccgcacagcgcgtggcccgcgagaccggcgtggcggtgcgcaccggcagcgcc
gtgtgcggcaccgagggcagcgccgaggacgggcgagtgagcgccgtgctggtcaccgcg
ctcgacgccgcggaccagcccgtggatgagccggagcgcgtcgaggcggacctgctggcc
gtcgccgggggctggagccccgtggtgcacctgcacagtcagcgccagggccggctgcgc
tgggacgaggacctcgccggtttcgtgcccgcgggcgcggtgcgcgaccagcagacagcc
ggcgcggtcaacggcaccctggaccttgccgggtgcctcgccgagggtgcccgcgcgggc
gctcaggccgcccaggacgcgggcttcgcgtgcacgccccgggttccccacaccgccgcc
acgcccatcacacccacccaccccctgtggctggtcccgagcgggcccggcgcggagcag
gactgggaccggcacttcgtggacctgcagcgggaccagaccgtcgcggacgtgctgcgc
tccgtgggtgcgggaatgcgttcggtggagcacgtgaagcgctacacctccatctccacg
gccaacgaccagggcaagacctccgcggtcaacgccatcggcgtgatcgccgcggcgctg
aaccagcaggacgtgggcggtttcggcaccaccacctaccgggcgccctacacgcccgtg
gccttcgcggcgctggccggacgacgccgcgggcagctcttcgaccccgcacgcctgacc
ccggtccactcgtggcacgtggcgcacggcgccgagttcgaggacgtggggcagtggaag
cgcccgtggttctacccgcagcccggtgaggacatggacgccgccgtgctgcgcgagtgc
gcggccgtgcgaacctccgtggggttcatggacgccaccacgctgggcaagatcgagatc
cgcggcacggacgccggggagttcctcaaccgcgtgtacacgaacgcgttcaagaagctc
aagcccggcatgggccgctacggcgtgatgtgcaccccggacgggatggtcttcgacgac
ggcgtgaccctgcgcctggacgaggaccgctacctgatgaccaccaccacgggcaacgcc
gccgcggtgctcgagtggctcgaggagtggtcccagacggagtggcccgagctggacgtc
accttcacgtccgtgaccgagcagtggaccacggtggccgtggccggtccgaggtcccgg
gacgtgatcgccaagctcgcaccgcagctggacgtctcccaggacgcgttcccgttcatg
gcgttccgggagaccgtgctcgcgtcgggggtcccggcgcggatctgccggatctcgttc
tcgggcgagctcgcgtacgaggtcaacgtgtccgggtggtacgggctgtccgtgtgggag
gacgtcttcgccgccggtgaggagttcgggatcaccccgtacggcaccgagaccatgcac
gtgctgcgcgcggagaaggccttccccatcgtgggccaggacactgacggcaccgtgacc
ccgcaggacctgggcatggagtgggtggtgtccaagaccaaggacttcatcggcaagcgc
tcctacgaccgcccctcggccacggacccgcagcgcaagcagctcgtggccgtgctgccc
acggaccgtgtgacccgcctgccggagggcgcgcagctgatcgcggcgggcacccccgtg
acgcccgagcagggccccgtgcccatggtcgggcacgtgacctccgcctaccgcagcgcg
gccctggaccgcacgttcggtcttgcactggtggagaacggccgccagcgcatcggcgag
accctccaggccccgctcgacggcacgctggtggacgtcacgatcgccgaacccgtcatc
tacgaccccgaagggaaccgccgagatggttga
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