Kocuria rhizophila: KRH_23310
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Entry
KRH_23310 CDS
T00701
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
krh
Kocuria rhizophila
Pathway
krh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KRH_23310 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
krh03019
]
KRH_23310 (recQ)
03400 DNA repair and recombination proteins [BR:
krh03400
]
KRH_23310 (recQ)
Enzymes [BR:
krh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KRH_23310 (recQ)
Messenger RNA biogenesis [BR:
krh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KRH_23310 (recQ)
DNA repair and recombination proteins [BR:
krh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KRH_23310 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
T1RK_2nd
ResIII
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
BAG30678
UniProt:
B2GJD0
LinkDB
All DBs
Position
complement(2669307..2671154)
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AA seq
615 aa
AA seq
DB search
MTSTATATTPLGVLQEVFGYDAFRGEQAEIIDQVVGGGDAVVLMPTGGGKSLCYQIPALL
REGTGVVVSPLIALMADQVAALEAVGIRAAFLNSTLEPYEAQEVERQLGAGEIDLLYMAP
ERLILSRTIALLKRSPIALFAIDEAHCVSQWGHDFRPDYMGLSVLADAFPDVPRIALTAT
ATRATHQEITERLRMENARHFVSNFDRPNIQYRIEPKDRAKDQLLRLIQSEHPGEAGIVY
CMSRKSVESTAAWLSARGVDAMPYHAGLDAAVRHETQVRFLREEGIVVVATIAFGMGIDK
PDVRFVAHLDLPKSIEGYYQETGRAGRDGMPATAWMAYGLGDVVNQRRMIDQGDGSDLHK
RNARSHLDAMLALCETTDCRRVQLLRYFGQDSEPCGNCDTCLNPPKVWDATVPAQKLLST
LIRLQRERGEQFGSGKVFDILLGRNNERTEASRHQELSVWGIGQDLSEREWRSVLRQLLA
RRVVEAVGDFGVLVPGPEAGPVLRGEIALELAVDRAPTARGGGRARSTGSGGRSRAADAL
DEAAKEMFEALREWRTSVAKEKQIPPYMVFSDATLVGIVEAAPASTAQLSGISGVGAKKL
EEYGDAVLEVLSSAG
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgacttccaccgccactgccaccacccccctgggcgttctgcaggaggtcttcgggtac
gacgccttccgcggtgagcaggcggagatcatcgaccaggtggtgggtggcggggacgcc
gtggtgctgatgcccaccggcggcggcaagtccctgtgctaccagatccccgcgctgctg
cgggagggcacgggtgtggtggtctctccgctgatcgcgctcatggcggaccaggtggcc
gcgctcgaagccgtgggcatccgcgcggccttcctcaactccaccctggagccctacgag
gcccaggaggtcgaacggcagctcggcgccggcgagatcgacctgctctacatggccccc
gagcggctcatcctgtcgcgcaccatcgccctgctgaagcgctcgccgatcgccctgttc
gcgatcgacgaggcgcactgcgtctcccagtgggggcatgacttccgccccgactacatg
gggctgtccgtgcttgcggacgccttcccggatgtcccccgcatcgcactcaccgcgacc
gctacgcgggccacccaccaggagatcaccgagcggctgcgcatggagaacgcgcggcac
ttcgtctccaacttcgaccgccccaacatccagtaccggatagagccgaaggaccgtgcc
aaggaccagctgctgcggctcatccagtcggagcacccgggggaggcgggcatcgtctac
tgcatgtcccgcaagagcgtggagtccactgccgcgtggctcagcgcccgcggggtcgac
gccatgccctaccacgcgggtctcgacgccgcggtgcgccacgagacccaggtgcggttc
ctgcgggaggaggggatcgtcgtcgtcgccacgatcgcgttcggcatggggatcgacaag
cccgacgtgcgcttcgtggcccacctggacctgcccaagagcatcgaggggtactaccag
gagaccggccgtgccgggcgcgacggcatgcccgccacggcatggatggcgtacggcctg
ggggacgtggtcaaccagcggcgcatgatcgaccagggcgacggatctgacctgcacaaa
cgcaatgcgcgctcgcacctggacgccatgctcgccctgtgcgagaccacggactgccgc
cgcgtacagctgctgcggtacttcggccaggactccgagccgtgcggcaactgcgacacg
tgcctgaacccgcccaaggtctgggacgccaccgtgcccgcccagaaacttctgtccacc
ctcatcaggctgcagcgcgaacgcggtgagcagttcggctccggcaaggtcttcgacatc
ctgctgggtcgcaacaacgagcgcacggaggcgtcgcgccaccaggagctgagcgtgtgg
gggatcgggcaggacctctccgagcgggagtggcggtccgtgctgcggcagctgctggcc
cgccgcgtggtggaagccgtgggtgacttcggtgtgctggttcccgggccggaggcgggt
cccgtgctgcgcggggagatcgccctggagctcgcggtggaccgcgcacccacggcacgt
ggtggcggtcgcgcccggtccaccgggagcggtgggcgctctcgggccgcggacgcactg
gacgaggccgccaaggagatgttcgaggccctgcgcgagtggcggacctccgtggccaag
gagaagcagatcccgccctacatggtgttctcggacgccacgctcgttggcatcgtggag
gccgctccggcctcgaccgcgcagctcagcggcatcagcggcgtgggcgccaagaagctc
gaggagtacggggatgcggtcctggaggtgctgagctccgcggggtga
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