Kribbella sp. CA-293567: OX958_09750
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Entry
OX958_09750 CDS
T10137
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kri Kribbella sp. CA-293567
Pathway
kri03420
Nucleotide excision repair
kri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OX958_09750
03430 Mismatch repair
OX958_09750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kri03400
]
OX958_09750
Enzymes [BR:
kri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OX958_09750
DNA repair and recombination proteins [BR:
kri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OX958_09750
MMR (mismatch excision repair)
Other MMR factors
OX958_09750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WBQ07066
LinkDB
All DBs
Position
2006130..2009351
Genome browser
AA seq
1073 aa
AA seq
DB search
MRAKLETTAELCDLLGIPFSDQQLQAITAPLAPGVIVAGAGSGKTTAMAARVVWLICTGQ
VQPEEVLGLTFTKKAANELDVRIREDLTKAGVLGSTLPKDQHPILAAHLRSNVPNWEPEE
PGEPVVSTYHAFAGTLIAEHGLRLGLEPDARVLADATRFQLAGRVVRRSNGPIRFASHHV
PTLVNSLLSLDGELADHLLGADEVRVHDEAVRAEVAAARKQTVDVKKLAETALKRGEILQ
LVEEYQAYKLERGVVDFADQMALGARLAEECPEVAVIERERFKVVLLDEYQDTSVSQRRM
LTALFGQFGHPVTAVGDPCQAIYGWRGASVANLDEFPEHFKNADGTPSRRYVLSVNRRCG
SRILAAANQHATELYQQHPGVIPLEAPPEAPEGAITVGLFETRSQEIEWVADAIVAAHRT
PNRRWKDIGILMRTNVDLSAVHEALISRKVPVEVVGLGGLLALPEVVDVVATLQAVNDLT
ANAAMLRILTGPRYRIGHRDLALLANRSRTLADAGDRPAADDLVAALDAAVAGMDSTEVI
SLAEAVDDPGPAGWGYSPEALERFKELSTELRELRAHAGEPLLDLVRRVIGTIGLDVELT
ATPDHVDSGRRDHLAAFLDAVGNFVSTESSGSLDGLLAYLAAEEEYAAGLDLAVPSEADS
VKLLTTHRSKGLEWPIVFVPTLVNKVFPSDRGRDKWTTNAKVLPWPLRGDADTLPTFHDL
SNAGLKAFADECKDVNALEERRLGYVAFTRAKEILVATGHWWGPTQKRPRGPSSYLETLK
KHAGDRVVAWAPQPEVDEENPELAEQKLAPWPAPYDEAAYRRRLESVALVELSRAEGPSQ
DAEDSLLLDEQATVARWDSELERLLSEARESRSRKAYDVELPSSLSATQVMRLAKDPDGL
AADLARPMPRKPNRAARFGTRFHAWVESYFGQQFLLDPDDLPGAADEDIVDDTDLTELMD
AFRVGPYGEKMPYEIEAPFALAIGGRMVRGRIDAVYQVIRPDGSRGYDVIDWKTSRSETA
DPLQLAIYRVAWAELLGLPVTQVGAAFYYVRTGDVVRPESLPDRTELITLLNG
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgagagccaaactggagacgacggccgagctgtgcgacctgctcggcatcccgttcagc
gatcagcaactgcaggcaatcacggcaccgctcgcgcccggagtgatcgtggcaggagcc
ggttcggggaagacgaccgcgatggctgcccgcgtggtctggctgatctgtaccgggcag
gtgcagccggaggaggtgctcggcctgaccttcaccaagaaggcggccaacgagctcgac
gtgcggatccgcgaggacctcaccaaggccggcgtactcggctcgaccctgccgaaggac
cagcacccgatcctcgccgctcacctgcgcagcaacgtccccaattgggagcccgaagag
ccgggcgagccggtcgtctcgacgtaccacgccttcgccggcacgctgatcgccgagcac
ggcctgcggctcggtctcgagcccgatgcgcgggtgctggccgacgcgaccaggttccag
ctggcgggtcgcgtcgtccgccggtccaacggaccgatccggttcgcctcccatcacgtg
ccgacgctggtcaacagtctgttgtcgctcgacggcgagctggccgaccacctgctcggt
gccgacgaagtacgggttcacgacgaagccgtacgcgctgaggtcgccgccgctcgcaag
cagacggtcgacgtgaagaagctcgccgagaccgccttgaagcgcggcgagatcctgcaa
ctcgtcgaggagtaccaggcctacaagctggagcgcggcgtcgtcgacttcgccgaccag
atggcgctcggcgctcggctggccgaagagtgtcccgaggtggcggtgatcgagcgggag
cggttcaaggtcgtcctgctcgacgagtaccaggacacctcggtctcgcaacggcggatg
ctgaccgcgctgttcggccagttcggccatccggtcacggcggtcggtgacccctgccag
gcgatctacggctggcgcggtgcctccgtcgccaacctcgacgagttccccgaacacttc
aagaacgccgacggtacgccgtcccgacggtacgtcctgagcgtcaaccggcgctgcggc
agcaggatcctcgcggccgccaaccagcacgcgaccgagctctaccagcagcatcccggc
gtgatcccgctggaagcgccgcccgaggcacccgagggcgcgatcacggtcggcctgttc
gagacgcgctcacaggagatcgagtgggtcgccgacgcgatcgtcgccgctcacaggacc
ccgaaccgccggtggaaggacatcggcatcctgatgcgcaccaacgtcgacctcagcgcg
gtgcacgaggccttgatcagccggaaggtcccggtcgaggtggtcggcctcggcgggctc
ctcgcgctgcctgaggtcgtcgatgtcgtcgcgaccctgcaagcggtcaacgacctgacc
gcgaacgccgccatgctgcgcatcctgaccggaccgcggtaccggatcggccaccgcgat
ctcgccctgctcgccaatcgctcccgcacgctcgccgacgccggcgatcgcccggcagcc
gacgatctggtcgcggccctcgatgccgcggtggccgggatggactcgaccgaggtcatc
tcgctggccgaagccgtcgacgatcccggtccggccggctgggggtactcgccggaggca
ctcgagcggttcaaggagttgtcgaccgagctgcgtgagctgcgcgcgcacgcgggggag
ccgcttctcgatctggtccggcgagtgatcggcacgatcggtctggacgtcgaactgacc
gcgactcctgatcacgtcgactccggccgccgggaccacctggccgcgtttttggatgcg
gtgggcaactttgtctccaccgagtcgagcggctcactcgacgggctgctggcctacctt
gcggccgaagaggagtacgcggccggtctcgacctcgccgtgccgagcgaggcggactcc
gtgaagctgctgaccacgcaccggtcgaaggggctcgagtggccgatcgtgttcgtgccg
accctggtgaacaaggtgtttccgtcggatcgcggacgcgacaagtggaccaccaacgcg
aaggtgctgccctggccgctgcgcggtgacgccgacaccctgccgacctttcacgacctg
tcgaacgccgggctgaaggccttcgccgacgagtgcaaggacgtcaacgcgctggaggaa
agacgcctcgggtatgtcgcgttcacccgcgccaaggagatcctggtcgcgaccggacac
tggtgggggccgacgcagaagcggccgcgtggcccctcgtcgtacttggagacgctgaag
aagcacgcgggggaccgggtcgtcgcctgggcgccccaacccgaggtcgacgaggagaac
ccggagctagccgagcagaagctcgcaccgtggcccgcgccgtacgacgaagcggcgtac
cggcgccggctcgaatcggtggcactggtggagctgtcacgcgctgaaggcccgtcgcag
gacgctgaggactcgctgctgctggacgagcaggccacggtcgcgcgctgggactccgag
ctggaaagattgttgtcggaggcaagagaaagccgcagtcgcaaggcgtacgacgtcgag
ctgccgtcctcgctgtcggcgacccaggtgatgcggctggccaaggacccggacggactg
gccgccgacctggcccggccgatgccgcgcaaacccaaccgggcggcgcgtttcggcacc
cgcttccatgcctgggtggaaagctacttcggccagcagttcctgctcgaccccgacgac
ctgccgggcgcggccgacgaggacatcgtcgacgacaccgacctgaccgagctgatggac
gccttccgcgtcggcccgtacggcgagaagatgccgtacgagatcgaggcgcctttcgcc
ctcgcgatcggcggccgaatggtccgcggccgaatcgacgccgtctaccaggtgatccgc
cccgacggctcccgcggctacgacgtcatcgattggaagaccagccgcagcgaaaccgcc
gacccactccagctcgccatctaccgagtcgcctgggccgagctcctcggcctcccggtc
acccaggtaggcgccgccttctactacgtccgcacgggcgacgtcgtccgccccgaaagc
ctccccgaccgcaccgaactgatcactctcctgaacggctga
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