Kribbella sp. CA-293567: OX958_09810
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Entry
OX958_09810 CDS
T10137
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kri Kribbella sp. CA-293567
Pathway
kri03420
Nucleotide excision repair
kri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OX958_09810
03430 Mismatch repair
OX958_09810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kri03400
]
OX958_09810
Enzymes [BR:
kri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OX958_09810
DNA repair and recombination proteins [BR:
kri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OX958_09810
MMR (mismatch excision repair)
Other MMR factors
OX958_09810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
DUF6011
Motif
Other DBs
NCBI-ProteinID:
WBQ07077
LinkDB
All DBs
Position
2018214..2020334
Genome browser
AA seq
706 aa
AA seq
DB search
MSQSVSNITQAVLGRSADELLEALDPEQRAVATALHGPIVVMAGAGTGKTRAITHRIAYG
VRIGTYDPARVLAVTFTQRAAGEMRGRLAQLGTNGVQARTFHSAALRQARYFWPKVFGGE
LPPIVDRKFPLLTEAANRCRVRVDTPALRDLAGEVEWAKVSNVRPDDYAKLAPESARALA
AFDPATIARVFAAYEDVKLERGRIDLEDVLLCAVALLAEDERVAAEIRRQYRTFVVDEYQ
DVSPLQQSLLDLWLGGREDVCVVGDPAQTIYSWAGADPANLVHFAQRHPTAQVIKLVRDY
RSTPQIVDVANKVLDAAGASGLPGRVTLRSQREAGPEPTYREYSDEVAEADAVARAVSRL
NDAGTALRDIAILFRTNAQSENFEQALAERKLPAMLKGAERFFERAEIRQAALLLRGQAK
AGDTGEDLVDTVRAVLGGAGWTADPPAGTGAVRDRWESLSALVTMASDFGAAHPEAGIVE
LMAELDRRASIQHAPLAEGVTLATLHAAKGLEWGCVFIVGAHEGTLPITYAQTPAQVEEE
RRLFYVGVTRAKDQLSISWSAARSPGGRASRGPTRFLDPIGVRTPRSGDREPSPRARAQR
SERSDLPIPKCRVCGRGLTEPAARKLGRCEDCPSTMDQALFDALFEWRADKAAEESLPAF
VIFTDATLTAIAEARPTDQRELLRIAGIGRTKLTKYGESVLNICTR
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtccgtgagcaacatcacgcaggccgttctcggccggtccgccgacgaactg
ctcgaggcgctcgaccccgagcagcgagccgtcgcgaccgccctgcacggcccgatcgtg
gtgatggccggcgcgggcaccggcaagacccgcgcgatcacccaccgcatcgcgtacggc
gtgcgcatcggcacctacgacccggcccgcgtcctcgccgtcaccttcacccagcgggcc
gccggtgagatgcgcggccggctcgcccagctcggcaccaacggcgtccaggcgcggacc
ttccactcggccgcgctcaggcaggcgcggtacttctggcccaaggtgttcggtggtgag
ctgccgccgatcgtcgaccgcaagttcccgctgctgaccgaggcggcgaaccgctgccgc
gtccgcgtcgacaccccggccctgcgcgacctggccggcgaggtggagtgggccaaggtg
agcaacgtccggccggacgactacgccaagctcgcgccggagtcggccagggccctcgcg
gccttcgacccggccacgatcgcccgcgtcttcgcggcgtacgaggacgtgaagctcgag
cgcggccggatcgacctggaggacgtcctgctctgcgcggtggcgctgctcgccgaggac
gagcgggtggcggccgagatccgccggcagtaccgcaccttcgtggtcgacgagtaccag
gacgtcagcccgctgcagcagagcctgctcgacctgtggctcggcggccgggaggacgtc
tgcgtggtcggcgacccggcgcagaccatctactcctgggccggtgccgatccggccaac
ctggtgcacttcgcccagcgccatcccaccgctcaggtgatcaagctcgtccgggactac
cgctcgaccccgcagatcgtggacgtcgccaacaaggtcctcgacgcggccggcgcgtcc
ggactgcccggccgggtcaccctccgctcgcagcgcgaggccggaccggagccgacgtac
cgggagtactccgacgaggtcgccgaggccgatgcggtcgcccgggccgtctcccggctc
aacgacgccgggaccgcgctgcgcgacatcgcgatcctgttccgcaccaacgcccagtcg
gagaacttcgagcaggcgctggccgaacgcaagcttcccgcgatgctcaagggcgccgag
cggttcttcgagcgggccgagatccggcaggccgccctgctgctgcgcggtcaggccaag
gccggcgacaccggtgaagacctggtcgacaccgttcgggccgtcctcggcggcgccggc
tggacagccgatccgccggccggtaccggcgcggtgcgagaccgctgggagtcactgagc
gcgctcgtcacgatggcctccgacttcggcgccgcccatccggaggcggggatcgtggag
ctgatggccgagctcgaccgccgtgcctcgatccagcacgcgccgctggccgagggagtc
acgctggcgaccctgcacgcggcgaagggcctggagtggggttgcgtcttcatcgtcggc
gctcacgagggcaccctgcccatcacctacgcccagaccccggcgcaggtggaggaggag
cggcggctcttctatgtcggcgtgacccgagccaaggaccagctctcgatcagctggtcg
gccgcccgctcgccgggtggccgcgccagccgtggaccgacccgcttcctggacccgatc
ggtgtccgtacgccgcggtccggcgaccgggagccgtcgccccgcgcccgggcgcagcgc
agtgagcgttcggacctgccgatcccgaagtgcagggtctgcggccgtggcctgaccgag
ccggccgcccgcaagctgggccgttgcgaggactgtccgtcgacgatggaccaggcgctg
ttcgacgcgttgttcgagtggcgtgccgacaaggcggccgaggagtcgttgccggccttc
gtcatcttcaccgacgccacgctgaccgcgatcgccgaggcccgcccgaccgaccagcgc
gagctgctccggatcgccggtatcggccggaccaagctgacgaagtacggcgaatccgtg
ctgaacatctgcacccgctga
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