Kribbella sp. CA-293567: OX958_11485
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Entry
OX958_11485 CDS
T10137
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
kri Kribbella sp. CA-293567
Pathway
kri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OX958_11485 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kri03021
]
OX958_11485 (rho)
03019 Messenger RNA biogenesis [BR:
kri03019
]
OX958_11485 (rho)
Transcription machinery [BR:
kri03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
OX958_11485 (rho)
Messenger RNA biogenesis [BR:
kri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OX958_11485 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
AAA_25
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WBQ07398
LinkDB
All DBs
Position
2372602..2374839
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AA seq
745 aa
AA seq
DB search
MTETVEASSGAGTSAPGTDATAAAGTRRRKSGGGLEGMLLPELKQLAGTLGIKGTGALRK
GQLIEAIKANQASIGSGGSRSRSSQPTLDEAAAEPVAAKAQPAAKAEPAQDAPQRTGSRR
TRAAATQSTAEPATQNGATPVAETAPAVAQTTSPVVEAAVQAPERTREQTDNSPADNSDR
GDRNDRGDRNEGTRDRNRGRDSQRDGRDNQARDNQSRDNQRDGRDAQARDNQSRDNQRDG
RDNQSRDGEQNRGDGQQNRDGGQNRADRDANRDGQQNRTDRDGNRDNPRDRQNQADRGEE
GEGRRRRRRGRDRERGTGDRPTNERNDRGDRNDRGPRDNPRSRGRNDRFEPEPTISEDDV
LVPAAGILDVLDNYAFVRTSGYLPGPNDVYVALSMVKRYGLRKGDAITGAVKQPSDGERK
EKFNPLVRIDTVNGSDPEVAKQRQDFNKLTPLYATERLRLETESNILTTRIVDIVSPIGK
GQRGLIVSPPKAGKTMVLQALANAITTNNPEVHLMVVLVDERPEEVTDMQRTVKGEVIAS
TFDRPADDHTTVAELAIERAKRLVELGHDVVVLLDSITRLGRAYNIAAPASGRILSGGVD
SSALYPPKRFFGAARNIEDGGSLTILATALIETGSKMDEVIFEEFKGTGNMELRLRREFA
DRRIFPAIDVVASGTRREELLMSKDETAVVWKLRRVLSALDGQAALELLIGKLKESKSNI
EFLMQVNKTTPSTGGGNGRSTDDGS
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
gtgacagaaactgttgaagcctccagcggagccggtacctcggccccgggcaccgacgcg
acggctgctgccggaacgcggcgccgcaagtccggaggcggcctcgaaggcatgctgctc
cccgagctcaagcagctcgccgggacgctcggcatcaagggcaccggcgcgctgcgcaag
ggccagctgatcgaggcgatcaaggccaaccaggcgagtatcggctcgggcggttcccgt
tcgcggtcgagccagccgaccctggacgaggccgccgcggagcccgttgccgccaaggcc
cagccggccgccaaggccgagcccgcccaggacgcgccgcagcgcaccggcagccgccgg
acccgcgccgccgccacccagagcaccgcggagccggccacccagaacggcgccaccccg
gtggcagagacggccccggccgtggcgcagaccaccagcccggtggtcgaggctgccgtg
caggcgccggagaggacccgcgagcagaccgacaactcgccggccgacaactccgaccgc
ggcgaccgcaacgatcgtggcgaccgcaacgagggcacccgcgaccgcaatcgtggccgc
gacagccagcgcgacggccgtgacaaccaggcccgcgacaaccagtcccgcgacaaccag
cgcgacggccgcgacgcccaggctcgcgacaaccagtcccgcgacaaccagcgcgacggt
cgcgacaaccagtcccgcgacggtgagcagaaccgcggcgacggccagcagaaccgggac
ggcggccagaaccgcgccgaccgggacgccaaccgcgacggtcagcagaaccgcaccgat
cgggacggcaaccgcgacaacccccgggaccggcagaaccaggccgaccgtggcgaggag
ggcgagggccgccgccgtcgccgccggggccgcgaccgcgagcgcggtaccggcgaccgc
cccacgaacgagcgcaacgaccgcggtgaccgcaacgaccgcggcccccgggacaacccg
cgcagccgtggccgcaacgaccggttcgagccggagccgacgatcagcgaggacgacgtc
ctggtcccggccgcgggcatcctcgacgtgctcgacaactacgccttcgtccggaccagc
ggctacctgcccggcccgaacgacgtgtacgtcgcgctgtcgatggtcaagcgctacggc
ctgcgcaagggtgacgcgatcaccggtgcggtgaagcagccgtccgacggcgagcgcaag
gagaagttcaacccgctggtgcggatcgacaccgtcaacgggtcggaccccgaggtcgcc
aagcagcgtcaggacttcaacaagctgaccccgctgtacgcgaccgagcggctccggctc
gagaccgagtcgaacatcctcaccacccggatcgtcgacatcgtcagcccgatcggcaag
ggccagcgcggcctgatcgtctcgccgccgaaggccggcaagacgatggtgctgcaggcg
ctggcgaacgcgatcaccacgaacaaccccgaagtacacctgatggtcgtgctggtggac
gagcggcccgaagaggtcaccgacatgcagcgcacggtcaagggtgaggtcatcgcctcc
accttcgaccggccggccgacgaccacaccacggtcgcggagctggcgatcgagcgggcc
aagcggctggtcgagctgggtcacgacgtggtcgtgctgctggactcgatcacccggctc
ggccgggcgtacaacatcgcggccccggccagcggccggatcctgtccggtggcgtcgac
tcgtcggcgctgtacccgccgaagcggttcttcggcgcggcccgcaacatcgaggacggc
ggttcgctgaccatcctcgcgacggcgctgatcgagaccggctccaagatggacgaggtc
atcttcgaggagttcaagggcaccggcaacatggagctccggctccgccgcgagttcgcc
gaccgccggatcttcccggccatcgacgtggtcgcctccggtacccgccgcgaagagctg
ctgatgtccaaggacgagaccgccgtggtctggaagctccgccgggtgctgtccgccctg
gacggccaggccgcgctggaactgctgatcggcaagctcaaggagagcaagtcgaacatc
gagttcctgatgcaggtcaacaagaccaccccgtccacgggcggcggcaacggccgcagt
accgacgacggcagctag
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