Kribbella sp. CA-293567: OX958_21385
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Entry
OX958_21385 CDS
T10137
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
kri Kribbella sp. CA-293567
Brite
KEGG Orthology (KO) [BR:
kri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kri03016
]
OX958_21385 (truB)
Enzymes [BR:
kri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OX958_21385 (truB)
Transfer RNA biogenesis [BR:
kri03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OX958_21385 (truB)
Prokaryotic type
OX958_21385 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WBQ02536
LinkDB
All DBs
Position
complement(4667807..4668724)
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AA seq
305 aa
AA seq
DB search
MTPTTSDAVDVSVADGIVVVDKPAGLTSHTVVAKVRRLAGTRKVGHAGTLDPMATGVLVV
GLNRATRLLGHLQLADKSYDATVFLGATSSTDDAEGEIEVSATASALAGVTAAVIEKAVV
AYRGPISQVPSKVSAIKVDGKRAYERVRAGEEVELKARNVTISRYDVLAVRAVADGIEVD
ISVDCSSGTYIRALARDLGADLGVGGHLTALRRTRVGAFGMSSAHTLEALGESFAMLPIA
DVAADTFPRYDADEEQAAAIRTGRPLPGLKLAADQQTAMFGPDGTFLALYEPHGPLAKPT
AVFVG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgactccgacgacgagtgacgcggtggacgtctccgtcgccgacggaatcgtcgtcgtc
gacaaaccggccgggctgacgtcgcacaccgtggtggcgaaggtccgccggctggcgggg
acccgcaaggtcgggcacgcgggcacgctggacccgatggccaccggcgtactggtggtc
ggcctcaaccgggctacgcggctgctgggccatctgcagttggccgacaagtcctacgac
gcgaccgtcttcctcggcgccacgtcctccacggacgacgccgagggggagatcgaggtt
tctgcgactgcttcggctctggccggggtgacggccgcagtgatcgagaaagccgtggtc
gcctatcgcgggccgatctcgcaggtgccttcgaaggtgtcggcgatcaaggtcgacggg
aagcgcgcctatgaacgcgtccgggccggcgaagaggtcgagctgaaggcgcggaacgtg
acgatcagccggtacgacgtactggcggtccgtgctgttgccgacggcatcgaggtcgac
atctcggtcgactgctccagcggcacctacatccgtgccctggcacgtgatctgggcgcc
gacctcggcgtcggcgggcacctcaccgcgcttcggcgtacgagggtcggagctttcggc
atgtcttccgcccacacgctggaagcgctgggcgagtccttcgccatgctcccgatcgcc
gacgtcgccgcggacaccttcccgcgctacgacgccgacgaggagcaggcagcggccatc
cggaccggccgtccgctgcccgggctgaagctcgcggccgatcagcagacggcgatgttc
ggcccggacgggactttcttggctttgtacgagccgcatggcccgctggcaaaacccact
gctgttttcgttggctaa
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