Ketogulonicigenium robustum: BVG79_00984
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Entry
BVG79_00984 CDS
T04841
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
kro
Ketogulonicigenium robustum
Brite
KEGG Orthology (KO) [BR:
kro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kro03016
]
BVG79_00984 (rnd)
Enzymes [BR:
kro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BVG79_00984 (rnd)
Transfer RNA biogenesis [BR:
kro03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BVG79_00984 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ARO14332
UniProt:
A0A1W6NYL8
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All DBs
Position
965062..966231
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AA seq
389 aa
AA seq
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MKIITTTAALASFCAEAAKNPYVTVDTEFLRERTYYAKLCLVQLAFSGPHADAALVDPLA
DGIDLAPLYALFRDTNVVKVFHAARQDLEIFSVGQDLIPAPLFDTQVAAMVCGYGEQVSY
ETLARKIAKADIDKTSRFTDWSRRPLSVAQQEYALADVTHLRQIYENLSAQIEKSGRAAW
VAEEMNILTNPETYRVDPDQAWLRVKTRTSSPKFLAVMRELARFREEYAQAQDVPRSRVF
KDDALLELASMKPASEDDLSGARLLLREARRGPIADGILAAVARALALRPDQMPRLPSEK
EKDLQVNPALADLLRVLLKARAEGEGVAQKLIASSAELDAIAAGQRDVQALTGWRLALFG
DDALALCQGKIALAAKGQNVVTIRLGEGA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattatcacgacgaccgcggcgctggccagcttttgtgccgaggctgccaagaac
ccctatgtgacggtcgataccgaatttctgcgcgagcggacctattacgccaagctgtgt
ctggtgcagctggcgttttcggggccgcacgccgacgccgctttggtcgacccgctggcc
gacggcatcgatctggcaccgctttatgcgctgtttcgcgacacgaatgtggtcaaggta
ttccacgccgcgcggcaggacctcgagattttttcggtcgggcaagatttgatccccgcg
cccttgttcgatacgcaggtcgccgcgatggtctgcggttatggcgagcaggtcagctac
gagacgctggcccgcaagatcgccaaggccgatatcgacaagacctcgcgctttaccgat
tggtcacgccgcccgctgtcggtcgcccagcaggaatatgcgctggccgacgtgactcac
ctgcggcagatctacgaaaacctttcggcccagattgaaaaatcgggccgcgctgcatgg
gtggccgaggaaatgaacatcctcaccaaccccgagacctatcgcgtcgaccccgatcaa
gcgtggctgcgagtgaaaacgcgcacatcctcaccgaagtttctggccgtgatgcgcgag
ctggccaggttccgcgaggaatacgcccaagcgcaagacgtgccgcgctcgcgcgtgttc
aaggatgacgcgctgctcgagctggcgtcgatgaagcccgccagcgaggatgacctgagc
ggcgcgcgcttgctgctgcgcgaggcccgccgcggcccgatcgccgatggtattctggcc
gccgtcgcgcgcgcgctggcgctgcgccccgaccagatgccgcgtctgccgtccgagaag
gaaaaagacctgcaggtcaatccggctttggccgacctgctgcgcgtgctgctgaaagcg
cgcgccgaaggcgaaggtgtggcgcaaaagctgatcgcgtcgtcggcggaactggatgcg
attgccgcagggcagcgcgatgtgcaggcgctgaccggttggcgtttggctttgtttggg
gatgatgcgctggcgctgtgccaaggcaaaatcgcgctggcagccaaggggcaaaacgtg
gtgacgatccgtctgggcgagggggcttaa
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