Entry |
|
Symbol |
holA
|
Name |
(GenBank) DNA polymerase III subunit delta
|
KO |
|
Organism |
kro Ketogulonicigenium robustum
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:kro00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BVG79_02411 (holA)
03430 Mismatch repair
BVG79_02411 (holA)
03440 Homologous recombination
BVG79_02411 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:kro03032]
BVG79_02411 (holA)
03400 DNA repair and recombination proteins [BR:kro03400]
BVG79_02411 (holA)
Enzymes [BR:kro01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BVG79_02411 (holA)
DNA replication proteins [BR:kro03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BVG79_02411 (holA)
DNA repair and recombination proteins [BR:kro03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BVG79_02411 (holA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(2397956..2399011)
|
AA seq |
351 aa
MKLNARDALAFFQRPDPAGMGALIAGEDQVRVAERRRQVLSALLGPNAEAEMRLTRIPAA
DLRKDGAMLLDALKAIGFFPGPRAVLLEDATDGLSAVIGKAMKEWQAGDAQLIITAGALT
ARSSLRKLAEGAPRFAAVVLYDDPPSPDEVMQMLATAGLTQVADDGRVAILSLSKLLDPG
DLRQTIEKLSLFKMGDAAPVSAADIAANAPQSHEADTDSLIATVALGRRGEIAGQMRLLY
AQGVQPVGLCIATLRHFRQLHAAMTHPGGVAEGLSSAQPPVFGPRRDAIIAQSRGWTTDR
VEGALQTILETDLRLRSANPPPQGPLVERMLLRLASIAKAQSSRGQDNNRR |
NT seq |
1056 nt +upstreamnt +downstreamnt
atgaagctgaacgcccgcgacgcgctggcttttttccagcggcccgaccctgcagggatg
ggtgcgttgatcgccggcgaggatcaggtccgggtggccgaacggcgtcggcaggtgcta
tccgcgctgcttggccccaacgccgaggccgagatgcgcctgacacgcatccccgctgca
gacctgcgcaaagatggcgcgatgctgctggacgccctcaaggccatcgggttttttccg
gggccgcgggcggtgctgctggaagatgcgacagacgggctgtcggcggtgatcggcaaa
gccatgaaagaatggcaggcgggcgacgcgcagctgatcatcaccgcaggcgcgctgacg
gcgcgatccagcctgcgcaaattggccgaaggcgcgcctcgtttcgccgctgtcgtcctt
tacgatgatccgccctcgcccgacgaggtgatgcagatgctggcaacggctggcctgacg
caagtggccgacgatgggcgggtcgccatcttgtccctatccaaactgcttgatccgggc
gatttgcggcaaaccattgaaaaattgtcgcttttcaagatgggtgatgctgcgccggtg
tctgctgcagatatcgccgccaacgccccccaaagtcacgaggcagatacagacagcttg
atcgccaccgttgcactggggcggcgcggcgagatcgcggggcagatgcgactgctgtac
gcccaaggcgtgcagcctgtgggcctgtgcatcgccaccctgcgccatttccgtcagctc
cacgctgccatgacgcaccccggcggcgtggccgaggggctatccagcgcgcagcccccc
gttttcggcccacgccgcgatgccatcatcgcccagtcgcgcggctggacaaccgaccgc
gtcgagggcgcgttgcaaaccattttggaaactgacctgcgtttgcgatctgcaaacccg
cccccgcaagggccgctggtcgaacggatgttgctgcggcttgcgtcaatcgcaaaggcg
caaagttcgcgcgggcaagacaacaatcggcgctga |