Kocuria rosea: EQG70_05505
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Entry
EQG70_05505 CDS
T06074
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
krs
Kocuria rosea
Pathway
krs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
krs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EQG70_05505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
krs03019
]
EQG70_05505
03009 Ribosome biogenesis [BR:
krs03009
]
EQG70_05505
Enzymes [BR:
krs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EQG70_05505
Messenger RNA biogenesis [BR:
krs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EQG70_05505
Ribosome biogenesis [BR:
krs03009
]
Prokaryotic type
rRNA helicases
EQG70_05505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_30
CMS1
UvrA_inter
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QCY32395
LinkDB
All DBs
Position
1200395..1202272
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AA seq
625 aa
AA seq
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MTVDTPSTPGTAEEHTITFAELGIDSRVLATLDEVGYENPTPIQAATIPVLLQGKDVVGL
AQTGTGKTAAFAVPALSRLAELSDVNGVSRDTQVLVLAPTRELALQVGEAFSSYATHLED
FTVLPVYGGSPYGPQLAGLRRGAQVVVGTPGRVIDHLKKGSLDLSHLQYVVLDEADEMLR
MGFAEDVEQILSQTPVEKQVALFSATMPPAIRKIAKQYLRDPQEIAVKGKTTTGTNTRQR
YLQVMGSHKMEAMTRILEVGDYDGVIVFVRTKAATEEVADRLKARGYAAAAINGDIPQNM
RERTVEALREGKIDVLVATDVAARGLDVERISLVVNYDIPHDTESYVHRIGRTGRAGRSG
EAILFMTPREKYLLRAIEKATRQPVELMRMPSTEDVNQTRKDKFAQQITDTMESEDLGQF
RELVEQYQAEHDVDAVEIAAAIAVMAQDGRPFFVEELPEPVQRTRDRDRPGRDGDDRPRR
EPRTEKGMATYRMSVGHRHRVSPGSVVGALTNEGGLSGEQIGAIDIRSTHTLVGLPENLP
ASTLDRLSRTRINGELIQLEADRGPGAGGRTRPRSTSSSYQDRPRRGGGARGDDSRGGYQ
GKRSGYSAGDRDGEKPFRKPRSKKY
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcgacacccccagcacccccggcaccgccgaggagcacaccatcaccttcgcc
gagctcggcatcgactcccgggtgctcgccaccctggacgaggtcggctacgagaacccc
acgcccatccaggccgccaccatcccggtgctgctgcagggcaaggacgtggtgggcctg
gcccagaccggcaccggcaagaccgcggccttcgccgtgcccgcgctgtcccggctcgcc
gagctctccgacgtcaacggcgtctcccgcgacacccaggtcctggtgctcgccccgacc
cgcgagctcgccctccaggtcggcgaggcgttctcctcctacgccacccacctcgaggac
ttcaccgtcctgccggtctacggcggctccccctacggtccgcagctggccgggctgcgc
cgcggcgcccaggtggtcgtcggcacgcccggtcgcgtgatcgaccacctcaagaagggg
tccctggacctgtcccacctgcagtacgtggtcctcgacgaggccgacgagatgctgcgc
atgggcttcgccgaggacgtcgagcagatcctctcgcagacgcccgtcgagaagcaggtc
gccctgttctccgcgaccatgccccccgcgatccgcaagatcgccaagcagtacctgcgg
gacccgcaggagatcgccgtcaagggcaagaccaccacgggcaccaacacccgccagcgg
tacctgcaggtcatgggctcccacaagatggaggccatgacccgcatcctcgaggtcggg
gactacgacggcgtcatcgtcttcgtgcgcaccaaggccgccaccgaggaggtcgccgac
cggctcaaggcccgcggctacgcggccgccgcgatcaacggcgacatcccgcagaacatg
cgcgagcgcacggtcgaggccctgcgtgagggcaagatcgacgtcctcgtggccacggac
gtcgcggcccgcgggctcgacgtcgagcgcatctcgctcgtggtcaactacgacatcccg
cacgacaccgagtcctacgtgcaccggatcgggcgcaccggccgcgccgggcgctccggc
gaggcgatcctgttcatgaccccgcgggagaagtacctgctgcgcgcgatcgagaaggcc
acccgccagccggtggagctcatgcgcatgccctccacggaggacgtgaaccagacccgc
aaggacaagttcgcccagcagatcacggacaccatggagtccgaggacctcggccagttc
cgcgagctcgtcgagcagtaccaggcggagcacgacgtcgacgccgtggagatcgccgcc
gcgatcgccgtgatggcccaggacgggcggcccttcttcgtggaggagctgcccgagccg
gtgcagcgcacccgcgaccgggaccgtccggggcgggacggcgacgaccgtccgcgccgc
gagccgcgcaccgagaagggcatggccacctaccggatgtccgtcggccaccggcaccgc
gtctcgccgggctccgtggtgggggccctcaccaacgagggagggctgagcggcgagcag
atcggggcgatcgacatccgctcgacccacaccctcgtgggcctgcccgagaacctgccc
gcctccaccctggaccggctctcccgcacgcgcatcaacggtgagctcatccagctcgag
gccgaccgcggtccgggtgccggcggccggacccggccccgcagcacctcgtcctcctac
caggaccgcccccgccgcggcggcggcgcccggggcgacgactcccgcggcggctaccag
ggcaagcgctccgggtactccgcgggcgaccgggacggcgagaagccgttccgcaagccg
cgcagcaagaagtactga
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