Kocuria rosea: EQG70_07075
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Entry
EQG70_07075 CDS
T06074
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
krs
Kocuria rosea
Pathway
krs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
krs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EQG70_07075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
krs03021
]
EQG70_07075
03019 Messenger RNA biogenesis [BR:
krs03019
]
EQG70_07075
Transcription machinery [BR:
krs03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EQG70_07075
Messenger RNA biogenesis [BR:
krs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EQG70_07075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
AAA
Motif
Other DBs
NCBI-ProteinID:
QCY32675
LinkDB
All DBs
Position
1532889..1535087
Genome browser
AA seq
732 aa
AA seq
DB search
MTETTDLSTGTEETTTSDPRNAGLSALKLAQLQALASQLGITGARRMRKSLLVDAIAAHQ
RGGAVADRDQAVEQKIAQTVEKTADGGADQGAAPAAATTGEDSSAAQGADGGQPQRRSRS
RRATSTGVVSVPAQQGSEQQDAAQQTAAQGATEQQPADQPAPAEDSSGAESEGGRNRNRS
RRNRNRDDNGQGNGGQDSGQETDEARSSAEGRDDDQSKQDRSRNQNRGQDNRGQDNRQDK
GGQDRGDGRGRRDGRSEGGKSQDGKGQDNRQDKGGQDNRQDKGGQDNRGQDNRQDDGGSR
RSRRNRNRNDRDRDRSDRNDRAERNERRNRRGRSTGPEVDDTEFTEDDVLLPVAGILDVL
DNYAFVRTSGYLPGPNDVYVSLAQVKKHNLRKGDAVVGAIRAPRDGEQQNATRQKFNALV
QLTTVNGKKTEENKDRVDFGKLIPLYPQERLRLETEPKKIGPRVVDLVAPIGKGQRGLIV
SPPKAGKTLMLQAIANAITTNNPEVHLMMVLVDERPEEVTDMQRTVKGEVIASTFDRPAD
DHTTVAELAIERAKRLVEMGMDVVVLLDSMTRLGRAYNLSAPASGRILSGGVDSAALYPP
KKFFGAARNIENGGSLTILATALVETGSKMDEVIFEEFKGTGNMELRLSRSLADKRIYPA
VDVNSSGTRREENLLSPDEIKIMWKLRRVLSGLDQQQALELLTNKLRDTQSNTEFLLQVQ
KTTLSARAESDR
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagaccaccgacctttccacgggtacggaagagaccaccaccagcgacccccgg
aacgcgggactgtccgcgctcaagctggcccagctgcaggcgctcgcctcccagctcggg
atcaccggcgcccgccggatgcgcaagagcctgctggtcgacgcgatcgccgcccaccag
cgcggcggcgccgtcgccgaccgggaccaggccgtcgagcagaagatcgcgcagacggtc
gagaagaccgccgacggcggcgccgaccagggcgccgccccggccgccgccacgaccggc
gaggactcctccgccgcgcagggcgccgacggcggccagccgcagcggcgctcgcgctcc
cgccgcgccacgagcaccggtgtggtgtccgtccccgcgcagcagggctccgagcagcag
gacgccgcccagcagaccgcggcgcagggcgccaccgagcagcagccggccgaccagccc
gctcccgccgaggactcctccggcgccgagagcgagggcggccgcaaccgcaaccgcagc
cgccgcaaccgcaaccgcgacgacaacggccagggcaacgggggccaggactccgggcag
gagaccgacgaggcgcgctcctccgccgagggccgtgacgacgaccagtcgaagcaggac
cggagccgcaaccagaaccgcggccaggacaaccggggccaggacaaccgccaggacaag
ggtggccaggaccggggcgacggccgcggccggcgcgacggccggtccgagggcgggaag
tcccaggacggcaagggccaggacaaccggcaggacaagggcggccaggacaaccggcag
gacaagggcggtcaggacaaccggggtcaggacaaccgccaggacgacggcggcagccgc
cgcagccgtcgcaaccgcaaccgcaacgaccgcgaccgggaccgcagcgaccgcaacgac
cgcgccgagcgcaacgagcggcgcaaccgccgcgggcgcagcaccggccccgaggtcgac
gacacggagttcaccgaggacgacgtcctgctgcccgtcgccggcatcctggacgtgctc
gacaactacgcgttcgtgcgcacctccggctacctccccggcccgaacgacgtctacgtc
agcctcgcccaggtcaagaagcacaacctgcggaagggcgacgccgtggtcggcgccatc
cgcgccccccgcgacggcgagcagcagaacgccacgcggcagaagttcaacgcgctggtc
cagctcaccacggtcaacggcaagaagaccgaggagaacaaggaccgcgtggacttcggg
aagctgatcccgctgtacccgcaggagcgcctgcgcctcgagacggagcccaagaagatc
gggccccgcgtcgtcgacctcgtcgcccccatcggcaagggccagcgcgggctgatcgtc
tccccgccgaaggccggcaagacgctgatgctgcaggcgatcgccaacgcgatcaccacg
aacaaccccgaggtccacctcatgatggtgctcgtcgacgagcgccccgaggaggtcacg
gacatgcagcgcacggtcaagggcgaggtcatcgcctcgaccttcgaccgcccggcggac
gaccacaccacggtcgccgagctcgcgatcgagcgcgccaagcggctcgtggagatgggc
atggacgtggtggtcctcctggactccatgacccgcctgggccgtgcctacaacctctcg
gcccccgcctccggccgcatcctctccggcggcgtggactccgcggcgctgtacccgccg
aagaagttcttcggggcggcccgcaacatcgagaacggcggctcgctcacgatcctcgcg
accgccctcgtggagaccgggtccaagatggacgaggtcatcttcgaggagttcaagggc
accggcaacatggagctgcgcctgtcccgctcgctcgcggacaagcggatctacccggcc
gtggacgtcaactcctcgggcacccgccgcgaggagaacctcctctccccggacgagatc
aagatcatgtggaagctgcgccgcgtcctctccgggctcgaccagcagcaggccctcgag
ctgctcacgaacaagctgcgggacacccagtccaacaccgagttcctgctccaggtgcag
aagaccacgctgtcggcccgcgccgagagcgaccgctag
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