Kocuria rosea: EQG70_07600
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Entry
EQG70_07600 CDS
T06074
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
krs
Kocuria rosea
Pathway
krs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
krs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EQG70_07600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
krs03400
]
EQG70_07600
Enzymes [BR:
krs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
EQG70_07600
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EQG70_07600
DNA repair and recombination proteins [BR:
krs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EQG70_07600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
HpcH_HpaI
Motif
Other DBs
NCBI-ProteinID:
QCY32760
LinkDB
All DBs
Position
1639271..1640212
Genome browser
AA seq
313 aa
AA seq
DB search
MPELPEVEVVRRGVERWVVGRRIESVQVLDPRSVRRHEPGPVSFGHELDGAVVADAVRRG
KFLWLPLTGADGAPPQEALLVHLGMSGQLLVKDAGLPDEKHLKVRLGLSERPGTPAELRF
VDQRIFGGMLLDRLVPTDDGAPGGRSATGVPLVPARAAHIARDPLDPAFDAERLHDRLRR
RRTGLKRALLDQALVSGIGNIYADEALWQARLHWARPTDTLRRPETLRLLAAVREVMDRA
LAAGGTSFDSLYVNVNGESGYFARSLSAYGRASLPCPRCAEEGRSTLIVREQFMNRSSYR
CPVCQRTPRNARF
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagctgcccgaggtcgaggtggtccgccgcggggtggagcgctgggtggtcggc
cgccggatcgagtccgtgcaggtcctggacccccgctcggtgcgccgccacgagcccggc
cccgtctccttcggccacgagctcgacggcgcggtcgtggccgacgcggtgcgccgcggc
aagttcctgtggctgccgctgaccggggcggacggcgccccgccgcaggaggcgctgctg
gtgcacctggggatgagcgggcagctgctggtcaaggacgccgggctgcccgacgagaag
cacctcaaggtgcggctgggcctgtccgagcgccccggcaccccggcggagctgcgcttc
gtggaccagcggatcttcggcggcatgctcctcgaccggctcgtccccaccgacgacggc
gccccgggcggccgttcggccacgggcgtcccgctggtgcccgcccgggccgcccacatc
gcccgggacccgctggaccccgccttcgacgcggagcgcctccacgaccggctgcgccgg
cgccggaccgggctcaagcgcgcgctgctggaccaggcgctggtctccgggatcggcaac
atctacgcggacgaggccctgtggcaggcgcgcctgcactgggcgcggcccaccgacacg
ctccggcggcccgagacgctgcgccttctcgcggccgtccgcgaggtcatggaccgcgcg
ctggcggccggcgggacgagcttcgactccctctacgtcaacgtcaacggcgagtccggc
tacttcgcccgctccctctccgcctacggccgggcctccctgccctgcccgcgctgcgcg
gaggaggggcgtagcaccctgatcgtgcgggagcagttcatgaaccgctcctcctaccgc
tgcccggtctgccagcgcacgccccgcaacgcccggttctga
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