Kosakonia sacchari: C813_02535
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Entry
C813_02535 CDS
T03601
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ksa
Kosakonia sacchari
Brite
KEGG Orthology (KO) [BR:
ksa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ksa03016
]
C813_02535
Enzymes [BR:
ksa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
C813_02535
Transfer RNA biogenesis [BR:
ksa03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C813_02535
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
Motif
Other DBs
NCBI-ProteinID:
AHJ73766
LinkDB
All DBs
Position
complement(2263196..2265130)
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AA seq
644 aa
AA seq
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MLQDNPLLAQLKQQLHSQTPRAEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDKI
IAVIHSDKDRESAEPEELVEPFLTRFVGKVQKKDDRLSIVPDHPLLKDAIPCRAARGVEH
DFKEGDWAVAEMRRHPLKGDRGFYAELTQFITFAEDHFVPWWVTLARHNLEKEAPNGVAT
EMLDDGLQRVDLTTLDFVTIDSASTEDMDDALYVAQTAEGELQLTVAIADPTAWIAEGSK
LDEAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPALVCRMTLDADGAIKDNIEF
FAATIESKAKLAYDDVSDWLENTGNWQPTNDAIAGQIRLLQRVSQLRAQWRQNHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGIYNVHLGFD
PANSEQLAAMLKTHGMHVDAEEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSFAEISVE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGETPKRPQDDATVQMSERRRLNRM
AERDVGDWLYARFLQNKAGTDTRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFIHAVRDE
LVCSQENGTVQIKGETVFKVTDVIDVTIAEVRMETRSVIARPVL
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgctccaggacaacccgctgctagcgcagcttaaacagcaacttcattcccaaactccg
cgtgcggaaggtgttgtaaaaggcactgaaaaaggctttggatttctggaagtcgacgcg
caaaaaagctacttcattccgccaccgcagatgaagaaagtgatgcacggcgacaagatt
attgccgtcatccacagcgataaagaccgtgaaagcgcggagcctgaagagctggtcgag
ccgttcttgacccgttttgttggcaaagtgcaaaagaaagacgatcgtctctctattgtg
cctgatcatccgttgctaaaagatgctatcccctgccgcgccgcacgtggcgttgagcat
gatttcaaagagggcgactgggccgttgccgaaatgcgtcgtcatccgctgaaaggcgat
cgcggtttctacgctgaactgacacagtttattacctttgccgaagaccactttgtgccg
tggtgggtcaccctggcgcgtcacaatctggaaaaagaagcgccaaatggcgtggcgacc
gagatgctggatgacggtttgcagcgtgtagatttaaccacgctggattttgtcaccatc
gacagcgccagcaccgaagatatggacgatgcgctgtatgttgcacagaccgctgaaggc
gaactgcaactgaccgtggcaatcgccgatcctaccgcctggattgccgaaggcagcaag
ctcgacgaggccgcgaagatccgcgccttcactaactatctgccgggtttcaatataccg
atgctgccgcgcgagctgtctgacgatctttgctctctgcgcgccaacgaagtgcgtcct
gcgctggtttgccgaatgacgctggatgcagacggcgcaattaaagacaatatcgaattt
ttcgcggcgaccatcgaatcgaaagccaaactggcttatgacgacgtctccgactggctg
gaaaatactggcaactggcagccaacaaatgatgcgatcgcggggcagatccgcctgctg
cagcgcgttagccagctgcgcgctcaatggcgccagaaccacgcgctggtatttaaagac
cgtccggattaccgctttgtgctgggcgagaaaggcgaagtgctggatatcgtcgccgag
ccacgacgcattgctaaccgcattgttgaagaatcaatgattgccgccaatatctgcgct
gctcgcgtgcttcgcgacaagctcggctttggtatttataacgtgcacctcggtttcgac
ccggcgaacagcgaacaactggccgcgatgctgaagacgcacggtatgcatgttgatgcc
gaagaagtgctgacgctggaagggttctgcaaattgcgtcgcgagctggacgctcagcct
tcagggttccttgatagccgcattcgccgcttccagtccttcgcggaaattagcgttgaa
cctggcccgcattttggccttggcctggaagcatatgcgacctggacctcgcctatccgt
aagtacggcgacatgatcaaccatcgtctgctgaaagcaattatcaaaggcgaaacgccg
aaacgtccgcaggacgatgccacagtgcaaatgtctgaacgccgtcgcctgaatcgtatg
gcggaacgcgatgtcggtgactggctctacgcccgtttcctgcaaaacaaagccggtacc
gatacccgtttcgcggcggaaattatcgatgtcagccgcggcggtatgcgcgtacgtctg
gtggataatggtgccgttgcctttataccggcgccgtttattcatgcggttcgcgacgag
ctggtgtgcagccaggaaaacggcaccgtgcaaattaaaggtgaaaccgtctttaaagtg
acagacgttattgatgtcacgattgcggaagtccgtatggaaacccgcagcgttattgcc
cgcccggtgctgtaa
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