KEGG   Kosakonia sacchari: C813_06600
Entry
C813_06600        CDS       T03601                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
ksa  Kosakonia sacchari
Brite
KEGG Orthology (KO) [BR:ksa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ksa03400]
    C813_06600 (helD)
Enzymes [BR:ksa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     C813_06600 (helD)
DNA repair and recombination proteins [BR:ksa03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    C813_06600 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C_2 UvrD_C AAA_30 AAA_12 DEAD
Other DBs
NCBI-ProteinID: AHJ74450
LinkDB
Position
complement(3085811..3087865)
AA seq 684 aa
MELKATSLGKRLAQHPYDRAVILNAGIKVAGDRHEYLIPFNQLLAIECKRGLVWGEMEFQ
LADNKVVRLHGTEWSETQRFYHLLNERWNRWSAEMSEVAAGVLSEQLELISGRIEPTKWL
TRKQLQGLQQQLQQAFAALPIPTSRLPEFDNCRELWRQCQSWLTDVEKRRAEHNQTYTET
MVTQYAAFFEQVETSPLNPAQARAVINGEHSLLVLAGAGSGKTSVLVARAGWLLARGKAS
ADQILLLAFGRKAALEMDERIQQRLHTEEITARTFHALALYIISQGSKKVPALSELENDT
SARLSLLTDTWCQQCSEKKAQAKGWRQWLEEEMEWEVPEGNFWEDAKLQRRIAPRLDRWI
GLMRMHGGAQAEMIASAPDDVRDLFSKRIKLMAPILKAWKAELKSENAVDFSGLIHQAIN
VLEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQL
SLTTAFHDYFGEGDLCALDTTYRFNSRIGEVANRFIQQNPWQLAKPLNSLKTGDKKAVTL
MAQDQLDALLDKLSGYATPEDRILVLARYHHGKPAVLEKAATRWPKLQLDFTTIHASKGQ
QADYVIVVGLKEGADGFPAPARESIMEQALLPQAEEFPDAEERRLLYVALTRARHRVWLL
FDKDEPSRFVDTLKSLDVPVARKP
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggaactgaaagcgacctcactgggaaaacgtctggcgcaacacccttacgatcgcgca
gtcattctgaacgccggcattaaagtggcaggtgacagacacgaataccttatccctttc
aatcagttgttagcgattgaatgcaagcgagggctggtgtggggagaaatggaatttcag
cttgccgacaacaaagtggttcgtcttcacggaacggaatggagcgaaacacagcgcttt
taccatcttttaaatgagcgctggaaccgatggagtgcggaaatgagcgaggtcgctgcc
ggggttttatctgagcaactggagctgatttccgggcgtattgagccaacgaaatggctt
acccgcaagcagcttcaggggctacagcagcaattgcagcaggcgtttgctgcattgccg
attccaacaagccgattacctgagtttgataattgccgtgagctctggcgccagtgccag
tcgtggctgacggatgttgagaagcgccgggcagagcacaatcaaacttatactgaaacg
atggttactcagtacgccgctttttttgagcaagtcgaaacatctcctttaaacccggca
caggctcgtgccgtgatcaacggtgaacactctttattagtgcttgctggcgcgggcagc
ggaaaaacttcggttctggtagccagagctggctggttgctggctcgtggcaaagcctcg
gcggatcaaatccttctgctcgcgtttggtcgcaaagctgccctggagatggatgagcgt
atccagcaacggctacataccgaagagattaccgcgcgcacttttcatgcgctggcgtta
tatatcatctcccagggaagcaaaaaggtgcccgcgttaagcgagctggaaaatgatacg
tcggctcgcttgtccttgctaacagacacctggtgccagcagtgcagtgaaaagaaagca
caggcgaaagggtggcgtcagtggctggaagaagagatggaatgggaagttcctgaaggc
aatttttgggaagatgcaaaattgcaacgccgcatcgctccacgtctcgatcgttggatt
ggactgatgcgcatgcatggtggtgcacaggcggagatgatcgccagcgcaccagatgac
gttcgtgatctgttcagtaagcgcattaaactaatggcgccgattttaaaagcgtggaaa
gccgagctaaagtctgaaaacgccgttgatttttccgggttgattcatcaggcaatcaat
gtgcttgaaaaagggcgttttattagcccatggaagcatattctggttgatgaatttcag
gatatttcaccgcagcgcgcggctttgctggctgcgttgcgtaagcaaaactcacaaacg
acactgtttgctgtcggggatgactggcaggctatctaccgtttcagcggcgcgcaactt
tccttaaccaccgctttccatgactattttggtgaaggcgatctctgcgcgctggatacg
acttatcgtttcaattcacgtattggcgaagtggcgaatcgctttatccagcagaaccca
tggcagcttgcaaagccattgaatagtttgaaaacaggcgataaaaaagcagtgacgctg
atggcgcaggatcaactggatgcactattagataagctcagtggatatgcaacgccggaa
gacaggatcctggttctggctcgttatcatcacggaaaacctgccgttctggagaaagca
gccacccgctggccgaaacttcagctcgattttacgactatacacgccagtaaagggcaa
caagcggattatgtgattgttgtggggctgaaagagggcgcggatggttttcctgccccg
gcgcgggaatccattatggagcaagccttgttgccgcaggcggaagagttccctgatgcg
gaagagcggcgattgttgtacgtcgcgttgacgcgcgcacgccatcgcgtctggttgttg
tttgataaagatgaaccgtcacgctttgtcgacacgttaaaatcgctggatgtgccagtc
gcgcgaaaaccgtga

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