Kosakonia sacchari: C813_09120
Help
Entry
C813_09120 CDS
T03601
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ksa
Kosakonia sacchari
Pathway
ksa00040
Pentose and glucuronate interconversions
ksa01100
Metabolic pathways
ksa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ksa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
C813_09120
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C813_09120
Enzymes [BR:
ksa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
C813_09120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_2
Beta-AFase-like_GH127_cat
Motif
Other DBs
NCBI-ProteinID:
AHJ74876
LinkDB
All DBs
Position
3588938..3590647
Genome browser
AA seq
569 aa
AA seq
DB search
MKLSKIALAVSLLGVFSCTAFAQESARLSSVKAFADTVIDKAGDKYHSNVPLLADGVDPR
TGKQMEWVFPDGKTAVLSNFSAQQNLMRVLVGLSNLTGDAKYKKRAEDNVRYYFQHYQDK
SGLLLWGGHRFIDLKTLEPQGPSEKEMVHELKNAYPWYDLMFAVDKPATARFIRAFWNAH
VYDWKILETSRHGEYGKEMGKLWASHFEQQPPFFATKGLSFLNAGNDLIYSASLLYQHDG
EKGALTWAKRLAEQYVLPRDKKTGLGVYQFTQALKRAETTDDTDTNSKYGDRAQRQFGPE
FGPDALEGNMMLKGRTSTLYSENALMQLALAKSLGADGNDIKKWTLDGLKAFAHYAYDEK
TNTFRPMLANGTNLSNYTLPRDGYYGKKGTVLKPYPAGNEFLLSYARAWTLAPDAEMWKV
ARGIAKGQGLGDIGEPGGKNNKLDLNTKNSEPYAIFALIDLWQSTGDKGYLTLADKVADN
ILATKRLNNFFIDDPQYIYANVDNIAPYALLALEAAMRGKLDAVAPFINGAGFTEGAYLL
ADGTVRYSTRDDELFMLKPGEQLKPNGKK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgtcaaaaatagcactggcggtcagtcttctcggtgtcttctcctgcacggca
tttgcgcaggagagcgcacgtttaagcagcgtaaaagcgtttgccgatacagtcatcgat
aaagccggcgacaaataccacagcaacgtgccactgctggcggatggcgttgatccgcgc
accggtaagcagatggagtgggtctttccggacggaaaaacggcggtactttccaacttc
tccgcacagcagaatctgatgcgcgtgctggttggcctgagcaacctgacgggagatgcg
aaatataaaaagcgggcggaagataatgtccgttactacttccagcactaccaggacaaa
agcgggctgctgctatggggcgggcatcgttttatcgatctgaaaacgcttgaaccgcaa
gggccaagcgagaaagagatggtccatgaactgaaaaatgcgtatccatggtacgacctg
atgtttgccgtggataaaccggcaaccgcccgctttatccgcgcgttctggaacgcacat
gtgtacgactggaaaatcctcgaaaccagccgccacggcgaatacggcaaagagatgggc
aaactgtgggccagccactttgaacagcaaccgccgttcttcgccaccaaagggctaagc
tttcttaacgctggcaacgacttaatttattctgcttcactgttgtatcaacacgatggc
gagaaaggcgcgctcacctgggcgaagcggttggcggagcagtatgtgttgccacgcgat
aaaaagaccgggttaggcgtttatcagtttacgcaagcgctgaaacgcgccgaaaccacc
gacgacacggataccaactcgaagtatggcgatcgcgcccagcgtcagtttggcccggaa
tttggccccgacgcgctggaaggcaatatgatgctgaaaggccgcaccagcacgctctac
tccgaaaacgccctgatgcaattagcgctggcaaaatcgctgggcgcggatggcaacgac
atcaaaaagtggacgcttgatggcctgaaagcctttgcgcattacgcctatgatgagaaa
accaacaccttccgcccgatgctggcaaacggcaccaacttgtcgaactacacgctgccg
cgcgacggttattacggcaagaaaggcaccgtgttaaagccttatccggcggggaatgaa
ttcctgctctcttatgcccgcgcctggacactggcaccggacgcagagatgtggaaagtg
gcgcgcggcattgccaaaggacaggggctgggtgatatcggtgagccgggcggcaaaaac
aacaagctggatctgaacacaaaaaacagcgagccgtatgccatttttgcgctgatcgat
ctctggcaatctaccggcgataaagggtacctgacactagcggataaagtggcggacaat
attctggcgacgaaacggctgaataactttttcatcgatgatccacagtatatttatgcc
aatgtcgacaatatcgcgccttatgcactgctggcgctggaagcggccatgcgtggcaaa
cttgatgcggttgcgccatttatcaacggcgcaggctttaccgaaggcgcgtatctgctg
gccgatggcaccgtgcgctactccacccgtgatgacgagttgttcatgctcaaaccgggt
gagcagttgaaacctaacggtaaaaagtaa
DBGET
integrated database retrieval system
