Kosakonia sacchari: C813_10125
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Entry
C813_10125 CDS
T03601
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ksa
Kosakonia sacchari
Brite
KEGG Orthology (KO) [BR:
ksa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ksa03400
]
C813_10125
DNA repair and recombination proteins [BR:
ksa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C813_10125
Archaeal homologous recombinant proteins
C813_10125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_15
nSTAND3
ABC_tran
AAA_21
cobW
MobB
ABC_ATPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHJ75047
LinkDB
All DBs
Position
3788182..3791322
Genome browser
AA seq
1046 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTEEPFASNGLFAITGATGAGKTTLLDAICLALYHETPR
LSTLSQSQNDLMTRDTADCLAEVEFEVKGVAYRAFWSQSRARGLPDGNLQAPRVELAACA
DGKILADKVKDKLDLTASLTGLDYGRFTRSMLLSQGQFAAFLNAKPRERAELLEELTGTE
IYGQISAMVFEKHKAAKTRLEQLQAQAKGVELLSDEQRQQLAQRLQALTDEEQRLLAGQR
DIQAQANWLNRDAELRAARGRAQAALVQAQQALAGAQPQIAALERAQPALQLRPLWDRLE
EQRKALVRTRAQSEEVNTRLHASLLQRARIRVSAQQQHATLRETQKTLESWLAENARFER
WQNELTGWRVLFNQLEEEKKQWLGLQQRVQTHEAKLRTLPESTLAMSAEETAAAMALCAQ
NRPLRQQLTALHARFAPLRKQLAQRQQSLLDLRAEQEKIGVELARKRELYKEKNQLLTEV
TTICELENRIKDLESERARLQPGHPCPLCGATEHPAIAHYQTLEPGVNQARRSALDLEVR
QVKEDGVALGERLKGLAERYEKDEREVKNLQQEEQNWLQEWAKACAALSVTLEPHRELTS
WQSAQDAYEHQLYLLNQRQTLQLQIRELHQQSEQYQQAVVARREKLATTLQQLDLALPPE
GEEELWLAARTQEAEQWQYQQQQLSALHEKMAQLTPILDTLPESDSANDGQTAALEGWRK
VHDACLALQSQWQTLHQQLAQEEQTAAALEQQFTDALGKSVFTDHQAFLDALLTEPERQR
LEQLRQKLDSECQQKQAVANSAEQALSAHQAQPPAALAPDTTVESIGLALDSMSHQLREN
TTRQGECRQQLKQDEDNRKRQQNVMQEIAHASVLYDDWGHLNALIGSKEGDKFRKFAQGL
TLDNLVWLANNQLNRLHGRYLLKRKESDALELEVVDTWQADAVRDTRTLSGGESFLVSLA
LALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKE
RIPVQIKVKKINGLGYSKLDGKFAVS
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctgagcctgcggctaaaaaacctgaactcgcttaaaggcgagtggaaaata
gacttcaccgaagagccgttcgcaagcaacggtctgttcgccattaccggcgcgaccggt
gcggggaaaaccacgctgctcgacgccatctgcctggcgctgtaccacgaaacaccgcgc
cttagcaccctttcacaatcgcaaaacgatttaatgacccgcgatacagctgactgcctt
gccgaagtggagtttgaagtgaaaggcgtcgcctaccgcgcgttctggagccagagccgc
gcccgcgggctgccggatggaaacttgcaagccccgcgcgttgagctggcggcctgcgcc
gatggcaaaatccttgccgataaagtgaaagataagcttgatcttaccgcctcactgacc
gggctggattatggccgctttacccgttccatgctgctgtcgcaggggcagttcgccgcc
ttcctcaatgcgaaaccgcgtgaacgcgcagagctgctcgaagagctgaccggcaccgag
atttacggccagatttccgccatggtgtttgaaaaacacaaagcggcgaaaacccggctt
gagcagttgcaggcgcaggcaaaaggcgtggaactgcttagtgatgagcagcgccagcag
cttgcgcaacgtttgcaggcgcttactgacgaagagcaacgtttgctggcagggcagcgc
gacatacaggcgcaggccaactggttgaaccgcgacgcagagttacgcgccgcgcgcgga
cgcgcgcaggccgcactggtacaggctcagcaggcgctggccggtgctcagcctcagata
gcggcgctggaacgcgcgcaaccggcgctgcaattgcgcccgctatgggatcggcttgag
gagcagcgtaaagcgctggttcgcacccgtgcgcagagcgaagaagtaaatactcgctta
catgccagcctgttacagcgtgcgcgcattcgcgttagcgcccagcagcagcatgcaaca
ttgcgggaaacgcagaaaacgctggaaagctggcttgctgagaacgcccgttttgagcgc
tggcagaacgaattaaccggctggcgcgtgttgttcaaccagctggaagaagagaaaaaa
cagtggctcggcctgcaacagcgtgtgcagactcacgaggcgaaactgcgcaccttgcct
gaatcgacactggcaatgagcgcggaagagacggcggcggcaatggcgttgtgcgcgcaa
aaccgcccgctacgccagcaacttaccgccctgcatgcccgttttgctccgctgcgcaaa
cagctggcgcagcgccagcagagcttgcttgatttacgcgccgagcaggaaaagatcggt
gttgaactggcgcgtaaacgcgagctgtacaaagagaaaaaccagctgctgacggaagtc
acgaccatttgcgagctggaaaaccgcatcaaagatctggaaagcgagcgcgcgcgtctg
caaccgggtcacccttgcccgctgtgtggcgcaaccgaacatccggcgattgcgcattat
caaactcttgagccaggcgtcaatcaggcacggcgcagcgcgctggatctggaagtgcgc
caggtcaaagaggatggcgtcgcacttggcgagcggctgaaagggttggctgaacgctac
gaaaaagatgagcgcgaagtgaaaaacctacaacaagaggagcaaaactggttgcaggag
tgggcaaaagcctgtgccgcgctcagcgtcacgctggagccgcatcgcgagcttaccagt
tggcaaagcgcgcaggatgcttatgaacatcagctttatttgctgaaccagcgccagaca
ctgcagttgcaaatccgcgaacttcatcaacaaagcgagcagtatcaacaagctgtggtt
gcccgccgtgaaaaactggcgaccacgctgcaacaactggatctggccctgccgccggaa
ggcgaagaggagctgtggctggcggcgcgcacgcaggaagccgaacagtggcaatatcag
cagcaacagctcagtgcgctgcacgaaaagatggcgcaactcacgccgatcctcgacaca
ctaccggaaagcgacagcgccaacgacgggcagacagcagcgctggaaggctggcggaaa
gtacacgatgcctgtcttgcgctgcaaagccagtggcaaaccctgcatcagcaactggcg
caagaggagcaaaccgcagccgcgctggagcaacaatttaccgatgcgctgggaaaaagc
gttttcaccgatcatcaggcctttctagacgccctgctcaccgaacctgaacgccagcgc
cttgagcagttacgtcagaagctcgacagcgaatgccagcagaaacaggcagtagcgaac
agcgctgaacaggcactgagcgcacaccaggcacagccgcctgcggcactcgccccggat
accacggttgaaagcatcggcctggcgctggactcgatgtcgcaccagcttcgggaaaat
accacccgccagggggaatgccgtcaacagttgaagcaggatgaagataaccgtaagcgc
cagcaaaatgtaatgcaggagatagcgcatgccagcgtgttgtatgacgactggggccat
ctgaatgcgcttatcggctccaaagagggagataaattccgcaaattcgcccagggttta
acgctggataacctcgtctggctggcgaacaaccagcttaatcgcctgcacggacgttat
ctgctgaaacgcaaggagagcgatgccctggaactggaggtagtcgacacctggcaagcg
gatgcggtacgcgatacacgcaccctttccggcggcgagagtttcctggtcagtctggcg
ctggcactggcgctctccgatctggtgagtcataaaacccgcatcgattcactgttcctc
gatgaaggcttcggcacgctggacagcgaaacgctggacacggcgctggatgctcttgac
gcgctgaacgccagcggcaaaaccatcggcgtgattagccatgtggaagcaatgaaagag
cgcatcccggtgcagatcaaagtgaagaaaattaacggactgggctacagcaagctcgac
gggaaattcgcggtgagttaa
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