Kosakonia sacchari: C813_11450
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Entry
C813_11450 CDS
T03601
Name
(GenBank) RNA polymerase-binding ATPase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ksa
Kosakonia sacchari
Brite
KEGG Orthology (KO) [BR:
ksa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ksa03021
]
C813_11450
Transcription machinery [BR:
ksa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
C813_11450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
Flavi_DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHJ75278
LinkDB
All DBs
Position
4078031..4080937
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AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFPATGENRLYARSDSPVTRVMFNPGDT
VTSHDGWQLTIEDVKEENGLLAYTGTRLDTQESNVTLREVLLDSKLVFSKPQDRLFAGQI
DRMDRFALRFRARKYQSEQYRMPWSGLRGQRTNLIPHQLHIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLAGAAERVLIVVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DADNPFETEQLVICSLDFVRRNKQRLEHLCDAEWDLLVVDEAHHLVWSENEASREYQAIE
QLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQQNYRPVADAVALLL
AGERLSNDDLNMLSDLVGEQDIEPLLQTANSDREGASAARQELISMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTVKLPLPTQYQTAIKVSGIMGARKSQEERARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFGEEDSGAQVLLCSEIGSEGRNFQFASHLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVHNELINYLAAPEDT
DGFDQLIKTCREQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIAEQDDDTALIAFAM
NLFDIIGINQDDRGENMIVLTPSDHMLVPDFPGLPEDGCTITFDRDVALSREDAQFVTWE
HPIIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPSTP
IRLLVDKNGTNLAGQVEFESFNRQLSAVNRHTGSKLVNAVQQEVHTILQKGETQVEAAAR
ELIDAARSEADEKLSAELARLEALKAVNPNIRDDELAAIESNRQQVLESLAQASWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccctttacacttggtcaacgctggattagcgacacggaaagcgaactcggacttggc
acagtcgtcgcaatggatgcgcgcacggtcaccctcctttttccggcaacgggtgaaaac
cgtctgtacgctcgcagcgactctccggttacccgcgtgatgttcaaccccggtgatacg
gtgaccagccatgatggctggcagctcacaattgaagacgtaaaagaggaaaacgggctg
ctcgcttacaccggcacacgcctggatacgcaggaaagcaatgtcaccctgcgcgaagtg
ctgctcgacagcaaactggtgttcagcaaaccgcaagaccgcttgttcgccgggcagatc
gaccgtatggatcgctttgcgctgcgttttcgcgcgcgtaaataccaaagtgagcagtac
cgtatgccgtggagcggcttgcgtggccagcgcaccaacctgatcccgcaccagctgcac
atcgctcacgatgtgggccgccgccatgcgccgcgcgtgctgctggcagatgaagtgggt
cttgggaaaaccattgaagccgggatgatcctgcatcaacaactgcttgctggcgcggct
gaacgcgtgctgatcgtggtgccggaaaccctgcaacatcagtggctggtcgagatgctg
cgccgctttaacctgcgtttcgccctgtttgacgatgaacgttacgccgaagcgcagcac
gatgccgacaacccgtttgagaccgagcaactggtgatttgctcgctcgatttcgtgcgc
cgcaacaagcagcgcctggagcacctgtgcgatgccgaatgggatctgctggtggtcgac
gaagcgcaccatctggtgtggagcgaaaacgaagccagccgtgaatatcaggcaattgag
caactggccgagcgcgtacctggcattctgctgctgaccgccaccccggaacaactgggg
atggagagccactttgcgcgcctgcgcttgctggatccgaaccgtttccatgatttcgcc
cagttcgttgaagagcagcaaaactaccgtccggtcgccgacgctgtggccctgctgctg
gcaggtgaacgcctgagtaacgatgatctcaatatgttgagcgatctggtgggcgagcag
gatatcgaaccgctgctgcaaaccgccaacagcgatcgtgaaggcgcgagtgccgcacgc
caggaactgatttccatgctgatggaccgacacggcaccagccgtgtgctgttccgcaac
acccgtaacggtgtaaaaggtttcccgaaacgcgagctgcacaccgtgaagctgccgctg
ccgacgcagtatcagacggcgattaaggtctccggcattatgggcgcgcgtaaaagccag
gaagagcgcgctcgcgatatgctctacccggagcaaatttatcaggaattcgaaggcgat
accggaacatggtggaacttcgacccgcgcgttgaatggctgatgggctacctcaccagc
caccgttcgcaaaaagtgctggtgatctgcgccaaagccgccaccgcgctgcagctggag
caggtgctgcgtgaacgcgaaggcatccgcgcggcggtgttccatgaaggtatgtcgatc
attgaacgcgatcgcgcggcggcgtggttcggtgaagaggacagcggcgcgcaggttctg
ctgtgctcggaaattggttctgaagggcgtaacttccagttcgccagccatctggtgatg
ttcgatctgccgttcaacccggatctgctggagcagcgcatcggccgtctggatcgtatt
ggtcaggcgcacgatatccagatccacgtgccttatctggagaaaaccgcgcagtccgtg
ctggtgcgctggtatcacgaagggctggacgccttcgagcacacctgcccgaccgggcgc
acgatttacgatagcgttcacaatgagttgattaactacctggcggcaccggaagatacc
gacggttttgatcagttgatcaaaacctgccgtgaacagcacgacgcgctgaaagcacag
ctggaacaaggccgcgaccgcttgctggagatccactctaacggcggtgaaaaagcacag
gcgctggcggaaagtattgccgagcaggacgacgacacggcgcttattgccttcgctatg
aacctgttcgatatcattggcattaaccaggacgatcgtggggaaaacatgatcgtcctg
acgccatcggatcatatgctggtgcctgacttcccgggcctgccggaggatggctgcact
atcactttcgatcgtgatgtcgccctttcgcgcgaagatgcacagtttgtcacctgggaa
catccgatcatccgtaacggtctggatctgatcctttctggcgatacgggtagcagcacc
atttcgctgctgaaaaacaaagcgctgccggtcggaacgctgctgctggagctgatctac
gtggtggaagcgcaggcgccgaaacagctgcaacttaatcgcttcctgccgtcgacgccg
atccgcctgctggtggataaaaacggcaccaacctcgccggccaggtggagttcgaaagc
ttcaaccgccagcttagcgcggtgaaccgccataccggcagcaagctggtgaacgcggtg
cagcaggaggttcacaccattttgcaaaaaggcgaaacgcaggtggaagccgccgcgcgc
gaactgattgacgctgcgcgcagcgaagcggatgaaaaactgtcggcggaactggctcgc
ctggaagcgttaaaagcggttaacccgaacatccgcgacgatgaactggccgccattgag
agcaaccgccagcaagtgctggaaagcctggcgcaggcgagctggcggcttgatgcgctg
cgtttgattgttgtgacgcaccaataa
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