Kosakonia sacchari: C813_13945
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Entry
C813_13945 CDS
T03601
Name
(GenBank) transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
ksa
Kosakonia sacchari
Brite
KEGG Orthology (KO) [BR:
ksa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ksa03000
]
C813_13945
Transcription factors [BR:
ksa03000
]
Prokaryotic type
Other transcription factors
Others
C813_13945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA
AAA_5
Mg_chelatase
AAA_16
AAA_22
NACHT
AAA_19
AAA_2
MCM
T2SSE
AAA_14
ATPase_2
AAA_7
TsaE
KAP_NTPase
GYF
ABC_tran
AAA_30
BrxC_BrxD
AAA_10
Motif
Other DBs
NCBI-ProteinID:
AHJ75707
LinkDB
All DBs
Position
4580938..4582524
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AA seq
528 aa
AA seq
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MKRRVVIGVLGTVLDKRGKRQNRFRKWRPTVGLCQQPDLTVDRLELLHQPRDEGLAQQTA
EDIALVSPHTEVRKHAVTINDPWDFEEVYAAFLDFATHYPFDTENEEYLVHITTGTHVAQ
ICWFLLTEARYLPASLLQTGPAEKGAADEAIAAGVCSVIDLDLSRYATLTSRFQREQQQS
VSFLKSGIDTRNATFNRLIEQIERVALRSTAPILLTGPTGAGKSFLTKRIFQLRQSRHLV
QGRLVAVNCATLRGDNAMSTLFGHVKGAFTGAQQARTGLLREADGGVLFLDEIAELGLDE
QAMLLKAIEEKTFFPFGSDKEVHSDFQLIAGTHRNMQQWVAEGRFREDLFARINMWTFAL
PGLAERREDIAPNIEYELQRFSQQQQTQIRFDKGARERYLAFACSPHAAWRGNFRELSTS
IARMATLAEQGRINDALVEEEVQRLAHHWRGESALPDLPVDISTLDLFDQRQLETVIAVC
RRSQTLSEAGRELFAISRQKKANPNDADRLRKYLSRFGLSWESVRGAT
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtcgggtggtaattggtgtactgggaacggtgctggataaacggggtaaacga
caaaaccgctttcgcaaatggcggcccaccgtagggttgtgccagcagccggatctcact
gtcgacaggcttgaactgctgcaccagccgcgcgatgaaggactggcgcaacagacggcg
gaagatattgccctcgtatcgccacataccgaggtacgcaaacatgcggtgacgattaac
gatccgtgggattttgaagaggtgtatgccgcgtttctcgatttcgctacccattacccg
ttcgatacggaaaacgaagagtacctggtgcatatcaccaccgggacgcacgtcgcgcag
atctgctggttcttgctgaccgaagcccgttatctgcccgccagcctgctgcagaccggt
ccggcggagaaaggtgcggctgacgaggcgatcgccgccggtgtctgttcggttatcgat
ctggatttaagccgttacgccacgctgaccagccgttttcagcgtgaacagcagcaatct
gtgtcgttcctgaaatccggtattgatacgcgtaatgccacctttaaccgcttaatcgag
caaatcgaacgcgtagcgctgcgctcgactgcgcccattctgctgaccgggccaaccggt
gcggggaaatcgtttctgacaaaacgcatctttcagttacgccagtcccgccacctggtg
caggggcgtctggtggcggtgaactgcgccacactgcgcggcgataacgccatgtcgacg
ctattcggccatgtgaaaggcgcgttcaccggcgcacaacaggcgcgcaccggactgctg
cgcgaggccgatggcggcgtgctgttccttgatgagatcgccgaactggggctggatgaa
caggcgatgctgctgaaagcgattgaagagaagacttttttcccctttggctccgataaa
gaagtgcacagtgattttcaacttattgcgggcacgcaccggaatatgcagcagtgggtg
gcggaaggtcgtttcagggaagatctctttgcgcgtatcaatatgtggacgttcgcgctg
ccgggtctggcggagcggcgggaagatatcgctccgaatattgagtatgaactccagcgt
ttttcacagcagcagcagacgcaaatccgctttgataagggcgcgcgcgagcgctatctg
gccttcgcctgctctccccacgcggcgtggcgcggcaactttcgcgaactgagcacgtca
atcgcgcgaatggcaacactggcggaacaggggcggattaacgacgcgttagtcgaggaa
gaggtgcagcgtttagcgcatcactggcgcggagaatcagcactacctgacctccccgtg
gatatcagcacgctggatctgttcgatcaacgccagttagaaacagtgattgccgtctgc
cggcgcagccagacgctttcggaagctggacgtgaattgttcgccatttcccggcagaaa
aaggccaatccgaatgatgcggatcgtctgcgcaaatacctgtcccgcttcgggctgagc
tgggaaagcgtacgcggagcaacataa
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