Kosakonia sacchari: C813_14465
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Entry
C813_14465 CDS
T03601
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ksa
Kosakonia sacchari
Pathway
ksa03420
Nucleotide excision repair
ksa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ksa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C813_14465
03430 Mismatch repair
C813_14465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ksa03400
]
C813_14465
Enzymes [BR:
ksa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C813_14465
DNA repair and recombination proteins [BR:
ksa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C813_14465
MMR (mismatch excision repair)
Other MMR factors
C813_14465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHJ75785
LinkDB
All DBs
Position
complement(4684225..4686387)
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQRDAVAAERSNMLVLAGAGSGKTRVLVHRIAWLMTVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGQKDEGIRPHHIQSFGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKLHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAQTIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGVDGELISLYCAFNELDEARYVVNRIKAWQDNGGQLSQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQATRELLQEKALAGRAASALQRFLELIDALAQETADMPLHVQ
TDRVISDSGLRMMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEACVEEVRLRASISRPVSHQRMG
TPVAQSDTGYKLGQRVRHAKFGEGTVVNMEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttatctgctcgacagcctcaatgacaaacagcgcgacgccgtagccgct
gagcgtagcaatatgctggtgctggcaggggcgggaagcggtaagacgcgcgtgctggta
caccgtatcgcctggctgatgaccgtggaaaattgctcgccatactccattatggcggtg
acttttaccaacaaagcggcggcggaaatgcgtcaccgcatcggccagttgatgggcact
tcgcagggcgggatgtgggttggcaccttccacggcctcgcgcaccgtttgctgcgcgcg
caccatatggacgccaacctgccgcaggatttccagattctcgacagcgaagatcagctg
cgtttactcaaacgtttgatcaaagcgatgaacctcgacgagaagcagtggccaccgcgt
caggcgatgtggtacatcaacggccagaaagacgaaggtattcgtccgcaccatattcaa
agtttcggtaacccggtggaacaaacctggcagaaagtttaccaggcctatcaggaagcc
tgcgatcgcgccgggctggtggatttcgccgaactgctgctgcgcgcccatgagttgtgg
ctcaataagctgcatattttgcagcactaccgcgaacgctttaccaatatcctggtggac
gaattccaggataccaacaacattcaatacgcgtggatccgcctgcttgcgggcgatacc
ggcaaagtgatgatcgtcggcgacgatgatcagtccatttacggctggcgcggtgcgcag
gtggaaaacatccagcgcttcctgaaagacttccctggcgcgcagacgatccgcctggag
cagaactaccgttcgaccagcaatattctgagcgcggcgaacgccctgattgagaataat
aacgggcgtttgggtaaaaaactgtggaccgatggcgtcgacggcgagctgatttcactc
tactgcgcctttaacgagctggatgaagcgcgttatgtcgtgaatcgcattaaagcctgg
caggataacggcggtcagctttcgcagtgcgccattctctatcgtagcaacgcccagtcg
cgcgtgctggaagaggcgctgctgcaagccagtatgccgtaccggatttatggcggtatg
cgattcttcgaacgtcaggaaattaaagatgcgctctcctacctgcgcctgatcgccaat
cgcaatgatgacgccgcctttgagcgcgtggtgaatacgccaacgcgcggcatcggcgat
cgcacgctggacgtggtgcgccaaacctcgcgcgatcgccagttgacgttatggcaggca
acgcgtgagttgttacaggagaaagcgctggcgggccgtgcggcgagcgcgctgcaacgt
ttccttgaactgattgacgcgctggcacaggaaacggcggatatgccgctgcatgtgcaa
accgaccgggtgatcagcgattccggcctgcgcatgatgtatgagcaggaaaaaggcgaa
aagggccagacgcgtatcgagaacttagaggaactggttaccgcgacgcgccagttcagc
tacaacgaagaagacgaagatttaatgccgctgcaggcatttctctcccacgccgcactg
gaagcgggcgaagggcaggcggatacctggcaggatgcggtgcagttgatgacgctgcac
tcggcgaaaggcctggagttcccgcaggtgtttattgtcggcatggaagagggcatgttc
cccagccagatgtcgctggatgaaggcgggcggctggaagaggaacgtcgcctggcgtat
gtcggtgtgacgcgcgccatgcaaaaactgaccttaacctatgcggaaacgcgccgcctt
tacggcaaagaggtgtatcaccgcccgtcgcgctttattggcgagttgccggaagcgtgt
gtggaagaggtgcgtttgcgcgccagcatcagccgcccggttagccatcagcgcatgggt
acgccggttgcgcaaagcgataccggctataaacttggccagcgcgtacgccatgccaag
tttggcgaaggcacggtggtgaacatggaaggcagcggtgagcacagtcgtttacaggtg
gctttccaggggcaaggtatcaaatggctggtggcggcttacgctaagctcgaaaccgtg
taa
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