Kosakonia sacchari: C813_14600
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Entry
C813_14600 CDS
T03601
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ksa
Kosakonia sacchari
Pathway
ksa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ksa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C813_14600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ksa03021
]
C813_14600
03019 Messenger RNA biogenesis [BR:
ksa03019
]
C813_14600
Transcription machinery [BR:
ksa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
C813_14600
Messenger RNA biogenesis [BR:
ksa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C813_14600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AHJ75806
LinkDB
All DBs
Position
complement(4711180..4712439)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
FDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgatcactctcggcgaaaat
atggggctggaaaacctggcccgtatgcgcaaacaggacatcattttcgccatcctgaag
cagcacgcgaagagtggcgaagatatctttggcgatggcgtgctggagattctgcaggat
ggatttggtttcctccgctccgcagacagctcctacctcgccggccccgacgacatctac
gtatcccccagccaaatccgccgtttcaacctccgcactggtgacaccatttcaggtaag
attcgcccgcctaaagaaggtgagcgttactttgcattgctgaaagttaacgaggtgaac
ttcgataagccggaaaacgcgcgcaataagattctgttcgaaaacttaacgccgctgcac
gcgaactctcgtctgcgtatggaacgtggtaatggctcgacggaagacttaaccgcacgc
gtactggatctggcgtcgccgatcggtcgtggtcagcgtggtctgattgtcgcaccgcca
aaagccggtaaaaccatgctgctgcagaacatcgcgcagagcattgcttacaaccatcct
gactgcgtattgatggtgctgctgattgacgaacgtccggaagaagtgaccgagatgcaa
cgtctggttaaaggcgaagtggttgcttctacctttgacgaaccggcttcccgtcacgtg
caggttgcagaaatggttatcgagaaggctaaacgcctggtcgaacacaagaaagacgtt
atcattctgctggactccatcacccgcctggctcgcgcttacaacactgttgttccagct
tcaggcaaagtgttgaccggtggtgtcgacgcgaacgccctgcaccgcccgaaacgcttc
ttcggtgctgcgcgtaacgtggaagagggcggtagcctgaccattatcgcgaccgcgctg
attgataccggttcaaaaatggacgaagtgatttacgaagagtttaaaggcaccggtaac
atggaactgcacctttcgcgtaaaattgctgaaaaacgtgtcttcccggcgattgattac
aaccgttccggtacgcgtaaagaagagctgctcaccactcaggaagagctgcagaaaatg
tggatcctgcgcaaaatcattcacccgatgggtgagatcgacgcgatggagttcctcatt
aacaagctggcaatgacgaagaccaatgatgaattcttcgacatgatgaagcgctcttaa
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