Kosakonia sacchari: C813_15435
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Entry
C813_15435 CDS
T03601
Name
(GenBank) pectate lyase
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
ksa
Kosakonia sacchari
Pathway
ksa00040
Pentose and glucuronate interconversions
ksa01100
Metabolic pathways
ksa01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ksa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
C813_15435
Enzymes [BR:
ksa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
C813_15435
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Paralog
GFIT
Motif
Pfam:
PelX_N
Pel9A-like_beta_helix
PelX_Ig
Beta_helix
Chondroitinas_B
Motif
Other DBs
NCBI-ProteinID:
AHJ75946
LinkDB
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Position
complement(4880873..4882990)
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AA seq
705 aa
AA seq
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MNYKIPLALTVCSSLISVPALAATAPVWKAIAFGQSTDVNFSSNVLPEKIGVNDVTIAGK
KLSVADEVTLTNPITIESRGGKIANSHDGLTFFYTQLPSNENFVLQATITVEQFGPENGA
KPAAQEGAGLLVRDVIGAPRQQPLKEGYEEFPTASNMVMNAIMTQDKKDNFRVKMQAITR
EGISQPWGNAGATISKQSYQEEVDLRQTPTFRMKLERTNDGFISAWAPQGSDQWVSRSVP
RANLISVQNKDHYYVGFFASRNAKIVVSDATLTTSKAQTIDSKPWQTKPLPVVVQIASPT
QSIGEAYTVQARANYDGLFSVRQNEVVIGNEKPVKAGEMYTLPTHLSAENTFALTFTPTS
GKDTTPIAQTFTVERVAGTMASTLYAAADGKADGEGTAASPLDLPTAISLLPPGGTINLK
AGDYARAEIPLTASGLRDKPKTLQADGKAVIHGLLVDASYWHIKGIEVTDKSLRVQGSHN
VIEKVVAWRNDDTGIQISSPENIGRALWASHNRVIDAESWGNEDPGKINADGFAVKMRVG
DGNRLERCFSHDNIDDGFDLFNKIEDGGNGVVVIENSIASNNTSNGFKLGGEGQPVAHQV
RNSKAIANHLDGFTDNFNPGALVVENNIAADNQRFNFIFRPSPYGDASTQGKFTNNKSVR
SAPGRYDDAVTGNIDETNYFIAKGQSVNNKGKVLDSGTVLAELKM
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgaattataaaatacctctggccctcacagtttgcagttcacttatttccgttcctgcg
ttggctgcaacagcccctgtctggaaagctattgctttcgggcaatctaccgacgtgaat
ttctcatcgaatgtgttaccggaaaaaataggcgtcaatgatgtcaccatcgccggtaaa
aagctctctgtcgcggatgaggtaacgttaacaaatccgatcaccattgaaagccgtggc
ggcaaaattgccaattcccacgacgggctgacgtttttttatacccagcttcccagtaac
gaaaattttgtcttgcaggcgaccattactgttgaacagttcggtccggaaaacggtgca
aaacccgccgcgcaggaaggtgcaggtttgctggtacgagacgtgataggtgctccgcgc
cagcagccgctgaaagagggttatgaagagtttccgacggcatcgaatatggtgatgaac
gccattatgacgcaggataaaaaagataatttccgcgtgaagatgcaagcgattacccgc
gaggggatcagccaaccgtgggggaacgccggcgccacgatctcgaaacagagttatcag
gaagaggttgatcttcgccagacgccaaccttccgcatgaaattagaacgtaccaatgac
ggttttatcagcgcatgggcaccgcagggcagtgatcaatgggtcagccgcagcgtaccg
cgcgccaatttgatttcggtgcagaataaggatcactattacgtgggtttttttgcctca
cgtaacgccaaaatcgtagtcagcgatgccacattaaccaccagcaaagcccagaccatc
gactcgaagccctggcagactaagccgttgccggttgtcgtacaaatagcctctcccaca
caaagcattggcgaagcctacacagtgcaggcacgcgctaattatgatggcttgtttagc
gttcggcagaacgaagtggtgatcggtaatgaaaaaccggtgaaagcgggtgaaatgtat
actctgccaacccacctgtcggcagagaacacgtttgcactgacctttacgccgacaagc
ggcaaagacaccactcccatcgcgcaaacattcactgtcgaaagggttgccggaacgatg
gcttctactctgtatgccgcagccgatggtaaagcggatggtgaaggcaccgctgcatcg
cctctggatttgccgacagcaatctctctgctgccgccaggcgggacgattaacctgaaa
gccggagattatgcccgggcagaaatcccactcactgccagcggcttacgtgataaacca
aaaacgctgcaagccgatggcaaagcggtgatccacggtttactggttgatgccagctac
tggcatatcaaaggcattgaagttaccgacaagagcctgcgcgtgcagggtagtcataac
gtgatcgaaaaagtcgtcgcctggcgtaatgacgataccggcattcaaatatcctcaccg
gaaaacattggtcgcgcgttgtgggcgagccataatcgcgtgatcgatgctgagtcatgg
gggaatgaagatccaggcaaaattaacgctgacggtttcgcggtgaagatgcgcgtcggt
gacgggaaccgcctggagagatgcttctcccatgacaatatcgatgacggttttgatttg
tttaataagattgaggacggcgggaacggtgttgtggtgatcgagaattctattgccagc
aacaataccagcaacggtttcaaactggggggagaaggacagccagtcgcgcatcaggtg
cggaacagtaaagcgattgctaaccatctggacggtttcactgacaactttaaccctggt
gcgctggtggtggagaacaatatcgctgcggataatcaacggtttaactttatttttcgc
ccaagtccctacggtgacgcgtctactcaggggaaattcaccaataacaaatccgtgcgc
agtgcgccgggccgctatgacgatgcagtgaccggaaatattgatgagacgaattatttc
attgcgaaagggcagagcgtgaacaacaagggaaaagttctggatagcgggacagtgctg
gcggaactgaagatgtag
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