Kosakonia sacchari: C813_16565
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Entry
C813_16565 CDS
T03601
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
ksa
Kosakonia sacchari
Brite
KEGG Orthology (KO) [BR:
ksa00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
C813_16565
Enzymes [BR:
ksa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
C813_16565
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
CHASE8
T4_deiodinase
Motif
Other DBs
NCBI-ProteinID:
AHJ76137
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Position
215747..217753
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AA seq
668 aa
AA seq
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MRVSRSLTIKQMAMVAVVSMVFVFIFCVILLFHFLQQNRYNTATQLESIARSVREPLSAA
ILKADIPEAEAIIKQIKPAGVVSRADVVLPNQFQALRMSFIPERPVPVMITRMFELPVQI
SLPIYSLERPANPQPLAYLVLQADSYRVYKFVISTLSTLVTAYLLLTLMLTVALTWCINR
LVVHPLRKISRALNDLPASELAGHQLPVPRLHHDDEIGIMVRSYNRNQQLLLRQQEELNA
QATHFPVSELPNKAFLMALLEQTVTRQNPTALLVIACETLRDTAGVLQESQREMLLLTLV
EKLKSILTPKMVLAQVSAYDFAIIAHGVSEPWHAMTLGKQVLTVINERVPLHGIQLRPNA
NIGVAMFYGNLSAGQLYHRAASAVVSAQRKGKNQIQFFDPEQMERAQQWLAQESDILTAL
DEGRFAIWLQPQVDAASGELVSAEALLRLRQPDGSWALPEGLIERIESCGLMVNVGYWVL
EESCRLLAGWQSRGIMLPLSVNLSACQLTHPTMLADMLDLLQRYRIAPQTLILEVTESRH
IDDPQAAVAILRPLRDAGVRIALDDFGMGYAGLRQLHHMKSLPVDVLKIDKMFVDGLPDE
NSMVAAIIHLARSLDLRIVAEGVENETQRTWLADAGVDVAQGFLFGRAASAEAFEQQFFA
VSDKPENT
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtgttagccgttctttaaccattaaacaaatggccatggttgctgttgtctctatg
gtgtttgtttttattttctgcgtcattttgctgttccatttcttacagcagaatcgctat
aacacggccacacaactggaaagcattgcccgctccgtacgcgaaccgctttccgcggcg
attttaaaagccgatattcccgaagcagaagcgattatcaaacagattaaaccggcgggc
gttgtcagccgcgcggatgtggtgctgccgaatcaatttcaggccttgcgcatgagtttt
atcccggaacgtccagttccagtgatgattacccggatgtttgaactgcccgtacaaatc
tccttgcccatctattcgctggagcgtccggcaaacccgcaaccgctggcctacctggtg
ctgcaggcggattcatatcgggtttataagttcgttatcagcaccttatcaacgttagtg
acggcttacttacttttgacgttaatgctcacggtggcgctcacctggtgtatcaaccgg
ctggttgttcacccgctgcgaaaaatttcccgggcgcttaatgatcttccggcgtcggag
ctggccgggcatcaactgccggtgcctcgtctccatcatgatgatgaaattggcatcatg
gtgcgcagttacaaccgcaaccagcagttgttgctgcgtcagcaagaagagctgaacgcc
caggcgacgcatttcccggtttctgaattgccgaataaagccttcctgatggcgctgctg
gagcaaacggtgacccggcaaaatcccaccgcgctgctggttatcgcctgtgaaacactg
cgtgataccgccggtgtgctgcaggagtctcagcgcgagatgttgctgctgacgctggtg
gagaaactgaaatcgatactgacgccgaagatggtgctggcgcaggtgagcgcttatgac
tttgcgattatcgcccatggtgtgagtgagccgtggcacgccatgacgctcggtaagcaa
gtgctcactgtaattaacgagcgtgtgccgctgcatggcatccaactgcgccccaatgcc
aatattggtgtggcgatgttttacggcaacctttctgccgggcagctttaccaccgggcg
gcttccgctgtcgtcagtgcgcagcgcaaagggaaaaaccagatccagttcttcgatcca
gagcagatggagcgggcacagcaatggctggcgcaggagagcgacattcttaccgcgctc
gatgagggacgtttcgcgatttggttgcagccgcaggtggatgcggcgagcggcgaactg
gtgagcgcggaagcgttgctccgtttgcgccaaccagatggcagttgggcattaccggaa
gggcttatcgaacgtattgagtcctgcggattgatggtcaacgtcgggtattgggtgctg
gaagagtcctgccgtctgctggcgggctggcaatcgcgcggcattatgctgccgctctcg
gtgaatctctcggcctgccagttgacgcatcccaccatgctggccgatatgctggatttg
ttgcagcgttaccgtattgcgccgcaaacgttgatcctcgaagtgacagaaagccgccat
attgatgatccccaggcagcagtggcgattctgcgcccgctgcgcgatgccggggtacgt
attgcgctggatgatttcggcatgggctatgccgggctgcgccagttgcatcatatgaag
tcgctgccggtggatgtgttgaaaatcgacaaaatgtttgttgacggtttgccggatgaa
aacagcatggtggccgccattatccaccttgcacgtagtctggatctgcgcatcgtcgct
gagggcgtggagaatgaaacgcagcggacatggctggctgatgcgggtgttgatgtggcg
cagggctttttatttggccgcgcggcatctgccgaggcgtttgaacagcagttttttgcc
gtatcggataagcctgaaaacacgtaa
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