Kosakonia sacchari: C813_20030
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Entry
C813_20030 CDS
T03601
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ksa
Kosakonia sacchari
Pathway
ksa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ksa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C813_20030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ksa03400
]
C813_20030
Enzymes [BR:
ksa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C813_20030
DNA repair and recombination proteins [BR:
ksa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C813_20030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AHJ76745
LinkDB
All DBs
Position
910462..913833
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AA seq
1123 aa
AA seq
DB search
MLRVYHSNRLDVLEALMEFIVEHNRLDDPFEPEVVLVQSTGMAQWLQMTLAQKFSIAANI
TFPLPASFIWEMFVTVLDGIPKESAFNKQSMSWKLMSLLPGMLEQEAFTMLRHYLNDDDD
KRKLFQLSSRVADLYDQYLVYRPEWLTRWEAGEQIDGLDEAQRWQAPLWRALVEHTAALG
QPHWHRANLYQRFIDKLESAEQRPAGLPSRVFICGISALPPIYLQALQALGKHIDVHLLF
TNPCRYYWGDIKDPAFLAKLITRNRRHHRENRQFPLFRDTQNAEGLFNADGEQDVGNPLL
ASWGKLGRDNIFLLAGMERYEELDAFVDITPGSLLQNLKYDILELQNGAVAGVTAEEFSR
SDKKRLLDPNDRSVTVHICHSPQREVEILHDRLLTMLEEDPELTPRDIVVMVADIDSYSP
YIQAVFGSATGERYLPYAISDRRARQAHPALQAFISLLSLPDSRFVSEDVLALLDVPVLA
ARFNINEEGLRYLRLWVNESGIRWGMDDDNVRELELPPTGQHTWQFGLTRMLLGYAMESR
QGEWQSILPYDESSGLIAELVGHLAELLMQLNIWRRGLSEARPLEEWLPVCRDMLNDFFL
PDQDTEAALALIEQQWQDIIAQGVGANYHDAIPLSLLRDELAQRLDQERISQRFLAGPVN
ICTLMPMRSIPFKVVCLLGMNDGVYPRALPPLGFDLMSQKPQRGDRSRRDDDRYLFLEAL
NSAQQQLYISYIGRSIQDNKERFPSVLVQELVDYIGQSHYLPGDALLNCDESEKRVKAHI
THLHTRMPFDPANYTADEWQSYVRDWLPAASLQGQAHAEFIQALDDVPLETLTFDQLQRF
WAHPVRAFFQMRLRVNFRPEESEIPDAEPFILDGLSRYQVNQEILNTLVEEQDAEKLFRR
YRAAGVLPYGAFGEIIWETQCQEMQELANRVIAYRQPSDSLEIDLHCAGVHLTGWLPRVQ
PDGLLRWRPALLSVSQGLQLWLEHLVYCANGCTGTSRLFVRKEGEWCFPPLPADKALEYL
ATLIEGYREGMVKPLLLLPESGGAWIKVCYDAANDAMLKDEETLQKAQSKFLQAYEGNMV
VRGEGDDVWYQRLWRTLEPEYYAEITEQAQRFLLPLYRHNQSD
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgttacgggtctaccactccaatcgtctggatgtgctggaagcattgatggagtttatt
gttgagcataacaggctcgacgatccctttgagcctgaagttgtgctggtacagagcacc
ggcatggcgcaatggctgcaaatgacgctcgcacagaagttcagcattgccgccaatatt
accttcccgctgcccgcgagctttatctgggagatgttcgtcaccgtactggacggaatc
cccaaagagagcgcgtttaacaaacagagtatgagctggaagctgatgtctctgctgccc
ggcatgctggagcaagaggcgttcaccatgctgcgccattatctgaatgatgacgatgac
aagcgtaaactcttccagctctcttcacgcgtggcggatctctacgatcaatatctggtt
taccgccctgagtggctgacgcgatgggaagcgggtgaacagatcgacgggctggatgaa
gcgcagcgctggcaagcaccgctgtggcgtgcattggtggaacataccgccgcgctgggg
cagccacactggcaccgcgccaatctctaccagcgttttatcgataagcttgaatcggct
gagcagcggcccgccggtttgccttcgcgcgtctttatttgtgggatttccgcgctgccg
cccatctatttgcaagcgcttcaggcgctgggtaagcatattgatgtccatcttttattt
acgaatccctgccgttactactggggcgacattaaagatccggcatttctggcgaaactg
atcacccgtaatcgtcggcatcaccgggaaaaccgacagtttcccctgttccgtgataca
caaaacgccgaaggtctgtttaatgctgatggcgagcaggatgttggcaaccctttgctg
gcttcgtggggcaagctggggcgggacaacattttcctgctggcgggcatggagcgctat
gaagagctggatgctttcgtcgacattacgcccggctcactgctgcaaaatctgaagtac
gatatcctggaactgcaaaatggtgcggtggcgggcgtaacggcagaagagttttcccgc
agtgacaaaaaacggctgcttgatcccaacgatcgcagcgtaacggtgcatatctgccac
agcccgcagcgagaagtcgagatcctgcatgaccgactgctaacgatgctggaagaggat
cctgaactgacgcctcgcgatatcgtggtcatggtcgccgatatcgacagctacagcccg
tatattcaggcggttttcggtagtgccacgggtgaacgttatcttccctatgctatttcc
gaccgccgcgcgcggcaggctcatccggcgctgcaggcctttatcagtttgctttccctg
cctgacagccgctttgtgagtgaagatgtgctggcgctgctggatgttccggtgctggcg
gcgcgtttcaacatcaatgaagaggggctgcgttacctgcgtttatgggtcaatgagtcc
ggcattcgctggggaatggacgacgacaacgttcgcgagcttgaattacccccgaccggg
cagcacacctggcaatttggcctgacgcgaatgctgctcggttatgcaatggaaagccgc
cagggggagtggcagtcgattttaccgtatgacgaatccagcgggcttatcgcggaatta
gtcggccacctggcggagctattgatgcagcttaatatctggcgtcgtggcttgtctgag
gcgcgaccgctggaagagtggctcccggtttgtcgcgacatgcttaatgactttttcctg
ccagaccaggacaccgaagccgcgctggcgctgattgaacagcagtggcaggacattatc
gcgcagggtgttggcgccaattaccacgacgcgatcccgctttcactactgcgtgacgag
ctggctcagcgcctcgatcaggagcgtataagtcagcgtttcctcgcggggcctgtgaat
atctgtaccctgatgccgatgcgctctattcctttcaaagtggtctgtctgctgggcatg
aatgatggtgtctacccgcgtgcgctgcctccgctggggtttgacctgatgagccagaag
ccacagcgtggtgaccgcagccgtcgggatgatgaccgctatttgttcctcgaagcgctt
aactcagcgcaacagcagctctatatcagctacatcggccggtctatccaggataacaaa
gagcgctttccctcggtgttggtgcaggagctggtggattacattggacagagccactac
ttaccaggcgatgccttgcttaattgcgatgaaagcgagaagcgggtaaaggcacatatt
acgcatctgcatacgcgtatgccgtttgatccggcaaactatacggctgatgagtggcaa
agttatgtccgtgactggctaccggccgcgagtttacaggggcaggcgcatgcggagttt
attcaggcactcgatgacgtgccgcttgaaacgctcacttttgatcagcttcagcgtttt
tgggcgcatccggtgcgtgcctttttccagatgcgcctgcgcgttaatttccgtccggag
gagagtgaaatcccggatgctgagccgtttatccttgatggcctgagccgttaccaggtc
aatcaggagatattaaatacgctggtcgaagagcaagacgcagagaagctgtttcgccgc
taccgcgcggctggcgtactgccttatggggcgtttggtgaaattatctgggaaactcaa
tgtcaggagatgcaggagctggctaaccgcgttattgcatatcgccagccttctgacagc
ctcgaaattgacctccattgcgcaggcgttcatctcaccggatggctgccgcgtgtgcag
ccagacgggctattgcgctggcgtccagccttgttgagcgtttcccaaggtttgcaactt
tggctggaacatcttgtctattgtgccaacggctgcaccggcaccagccgcttgttcgtt
cgcaaagagggcgaatggtgttttcccccgctacctgctgataaggcgctggaatatctg
gcaacgctgattgaaggctatcgggaaggcatggtgaaaccgcttctgttattgccggaa
agcggcggcgcgtggataaaagtctgttatgacgcggcaaatgatgccatgttaaaggac
gaagagacgttacaaaaagcgcagagtaaatttctgcaggcgtacgaaggcaatatggtg
gtgcgtggtgaaggcgatgatgtctggtatcagcgcctgtggcgaacccttgaacctgag
tattacgctgaaattaccgaacaagcgcagcgttttctgttaccgctttatcgacacaac
cagtccgattga
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