Kosakonia sacchari: C813_20155
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Entry
C813_20155 CDS
T03601
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ksa
Kosakonia sacchari
Brite
KEGG Orthology (KO) [BR:
ksa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ksa03016
]
C813_20155
Enzymes [BR:
ksa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
C813_20155
Transfer RNA biogenesis [BR:
ksa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C813_20155
Prokaryotic type
C813_20155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AHJ76767
LinkDB
All DBs
Position
940323..941372
Genome browser
AA seq
349 aa
AA seq
DB search
MTDFDNLTFLHGKPAASGVLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGNAMPDLSAFQLEGCKVLEYARHKRK
LRLGALQGNAFTLVLREISDRADVDARLQAIAEKGVPNYFGAQRFGIGGSNLQGALRWAQ
SDAPVRDRNKRSFWLSAARSALFNQIVSERLKKTDFNQVVDGDALQLAGRGSWFVATCEE
LAELQTRVEAKALMITASLPGSGEWGTQRDALAFEQQAVADAPDLQALLVREKVEAARRA
MLLYPQKLSWNWWDDVTVELRFWLPAGSFATSVVRELINTSGDYANIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacagattttgataacctgacatttttgcatggcaaaccggcggcaagcggcgttctg
aaagccaatccggaagatttcgtggtggtggaagatcttggctttgagcctgatggcgaa
ggcgagcatattctggtgcgcatcctgaaaaatggctgcaatacgcgttttgtggccgat
gcactggcaaaattccttaaaatccacgcgcgtgaagtgagctttgccgggcaaaaagat
aaacacgctgtcactgagcagtggctgtgtgcccgcgtaccgggtaatgcaatgcccgat
ctcagcgcgtttcagcttgaaggctgcaaagtgttggaatatgcccgtcacaagcgcaag
ctgcgcctcggtgcgttgcagggcaatgcgtttacgctggtactgcgcgaaatcagcgac
cgtgcggacgttgacgcgcgtttgcaggccatcgcggagaaaggtgttccgaattatttc
ggcgctcagcgctttggcatcggcggcagcaacctgcaaggcgcgcttcgctgggcgcag
agcgatgcgccggtgcgcgatcgtaacaagcgcagtttttggttgtcggcagcgcgtagc
gcgttgtttaatcaaatcgtcagcgagcggttgaaaaaaacagactttaatcaagttgtt
gacggcgatgcgctacaattagcggggcgcggcagctggtttgttgcaacctgtgaagag
ctggcggaactgcaaacgcgcgttgaggcgaaagcgctgatgattaccgcgtcgctgcca
ggcagcggcgagtggggcacacagcgtgacgcgctggcgtttgaacaacaggcggttgct
gatgcgccggatctacaggcgctgctggtgcgggagaaagtcgaagccgcgcgccgcgcg
atgctgctctacccgcaaaaattaagctggaactggtgggatgacgtcaccgtcgaatta
cggttctggcttccggcgggcagctttgccaccagtgtcgtcagggaacttatcaacaca
tcgggtgattatgcgaatattgctgagtaa
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