Kosakonia sacchari: C813_21760
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Entry
C813_21760 CDS
T03601
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ksa
Kosakonia sacchari
Brite
KEGG Orthology (KO) [BR:
ksa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ksa03009
]
C813_21760
Enzymes [BR:
ksa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C813_21760
Ribosome biogenesis [BR:
ksa03009
]
Prokaryotic type
rRNA helicases
C813_21760
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
AHJ77047
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All DBs
Position
complement(1245793..1247127)
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AA seq
444 aa
AA seq
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MTVTTFSELELDDSLLDALQSKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAANTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKNFAERLLEDPVEVSATPSTRERKKIHQWYYRADDVAHKTALLV
HLLKQPEVSRSIVFVRKRERVHELANWLREAGINNCYLEGEMVQAKRNEAIKRLTEGRVN
VLVATDVAARGIDIDDVSHVFNFDLPRSGDTYLHRIGRTGRAGRKGTAISLVEAHDHLLL
GKIGRYVEEPLKPRVIDELRAKTRAPSEKLTGKPSKKVLAKRAEKKKEKEKEKPRVKQRH
RDTKNIGKRRKPSAASTAPQNTEE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaactcgaacttgacgacagcctgctggacgcgctccag
agcaaaggctttacacgcccgaccgccatccaggccgccgccattccgcctgcgcttgaa
gggcgtgatgtcctcggttccgcccctaccggcaccggtaaaacagcggcatatctgctg
cctgcgttgcagcaccttctggacttcccgcgtaaaaaatccggcccgccgcgcatcctg
atcctgacgccgacccgcgagctggcgatgcaggtggccgatcacgcgcgtgagcttgcc
gcgaacacgcatctggatatcgccaccattaccggtggtgtagcgtatatgaaccacgcg
gaagtgttcagcgaaaaccaggatatcgtggtcgcgaccactggccgcctgctgcaatat
atcaaagaagagaacttcgactgccgcgcggtagagacactgatccttgacgaagcagac
cgcatgctggacatgggcttcgcgcaagatattgagcatattgccggtgaaacccgctgg
cgcaaacagaccatgctgttctccgcgacgctggaaggcgacgcgattaaaaattttgcc
gagcgcctgctggaagatcctgtcgaagtttccgccacgccctcaacgcgtgagcgcaag
aaaattcaccagtggtactaccgtgccgacgacgtcgcccataaaactgcgctgctggtg
catctgctcaagcaacctgaagttagccgctctatcgtgtttgtgcgcaaacgcgagcgc
gtgcatgagctggcaaactggctacgagaagcgggcattaacaactgctatctcgaaggt
gagatggtgcaggcgaagcgtaacgaagcgattaaacgcctgacggaaggccgtgtgaat
gtactggtcgccaccgatgtcgccgctcgcggcattgatatcgacgatgtcagccacgtc
tttaacttcgatctgccgcgcagcggcgatacctatctgcaccgaatcggtcgtacgggt
cgtgcaggccgtaaaggcaccgcgatttcgctggtcgaagcgcacgatcatctgctgctg
ggtaaaattggccgttatgttgaagaaccgctgaagccgcgcgtgatagacgaattgcgt
gcaaaaacgcgcgcgcccagtgaaaagctgacaggcaaaccgtcgaagaaagtgctggcg
aaacgcgcagagaagaaaaaagagaaagaaaaagagaaaccgcgtgtgaagcaacgccat
cgtgacaccaaaaacattggcaaacgacgtaagccgagcgctgcaagtaccgcgccgcaa
aatacagaagagtaa
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