Kosakonia sacchari: C813_23400
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Entry
C813_23400 CDS
T03601
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
ksa
Kosakonia sacchari
Brite
KEGG Orthology (KO) [BR:
ksa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ksa03400
]
C813_23400
DNA repair and recombination proteins [BR:
ksa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
C813_23400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
AAA_16
AAA_22
zf-tcix
SLFN-g3_helicase
UPF0547
AAA
TniB
Motif
Other DBs
NCBI-ProteinID:
AHJ77332
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Position
complement(1597396..1599156)
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AA seq
586 aa
AA seq
DB search
MTFTLRPYQREAVDATLAHFRQHAEPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYVALGLEADIFAAGLKSKQSHGKVVFGSVQSVARNLAQFQGEFSLLVVDECH
RIGDDDNSQYQQILNHLREVNPHLRLLGLTATPFRLGKGWIYRFHYHGIVRGDEKALFRD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQTQSNGLFSEADLNRELKKQQRVTPH
IVSQIVEFAQTRKGAMIFAATVEHAREITGLLPANDAALITSETPGPQRDTLIEAFKKQQ
FRFLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP
HDLYAPEIGAPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWLEDDEG
HREQCDFRFRFKNCPQCNAENDIAARRCRTCDTVLVDPDDMLKAALKLKDALVLRCSGMT
LQQGTDEKGEWLKITYYDEDGADVSERFRLQTAAQRTAFEQLFIRPHTRTPGVPLRWIVA
ADIVAQQALLRHPDFVVARMKGQYWQVREKVFDYEGRFRRAHELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacttttactttacgcccctatcaacgcgaagcggtggacgccaccctcgcccacttc
cgtcaacatgccgaacctgcagtcattgtactgcccaccggtgcaggaaagagcctagtt
atcgccgaactggcgcggcttgcgcgcgggcgcgtattggtgctggcgcatgttaaagag
ctggtggcgcaaaaccacgcgaagtatgtcgcgcttgggctggaggccgatattttcgcc
gccggtcttaaaagcaaacagagccacggcaaagtggtatttggcagcgtccagtccgtc
gcgcgtaatctggcgcagtttcagggcgaattttccctgctggtggtcgatgagtgccac
cgcatcggcgacgacgataacagccagtatcagcaaatcctcaaccatttacgcgaagtg
aatcctcatctacgtttgcttggcctgacggcgacaccttttcgcctcggtaaaggctgg
atttaccgttttcattatcacggcattgtgcgcggtgatgaaaaggcgctgtttcgcgac
tgcatttatgaactaccgctgcgctacatgattaaacacggttacctcacaccaccagaa
cggctggatatgccggtcgtgcagtacgatttcagccgtttgcagacgcaaagtaatggc
ctttttagcgaagcggatttgaaccgtgagctaaaaaagcagcagcgcgttacgccgcac
attgttagccagattgtagaatttgcgcagacgcgcaaaggggcgatgatttttgccgcc
accgttgaacatgcacgagagataacgggcttgttacctgccaatgatgcggcgctgatt
accagtgaaactcccggcccacagcgtgataccttaatcgaagccttcaaaaagcaacaa
tttcgctttctggtaaacgtcgcggtgctgactacgggctttgatgcgccgcatgtggat
ttgatagctattctgcgcccgaccgaatccgtcagcctgtatcagcaaattgttggtcgc
ggcctgcgcctcgcgccagggaaaactgactgtttaatccttgattacgcgggcaacccg
cacgatctctacgccccggaaatcggtgcgccaaaaggtaaaagcgataatgtgccggtg
caggtgttctgcccggcgtgcggttttgccaataccttctggggaaaaaccaccgccgac
ggcacgttgattgaacatttcggccgccgctgccagggctggctggaagatgatgaaggc
caccgcgagcagtgcgatttccgttttcgctttaaaaactgcccgcaatgcaatgcagaa
aatgatatcgccgcccgtcgctgtcgcacctgcgatacggtgctggttgacccggacgat
atgctaaaagcggcgctgaaactgaaggatgcgctggtgctgcgctgcagtggcatgacg
ttacaacagggtacggatgaaaaaggcgaatggctgaaaatcacctattacgatgaagat
ggcgcggatgttagtgagcgcttccgtctgcaaactgccgcgcaacgcaccgcctttgag
caactctttattcgcccacacacccgcacaccaggcgtgccgctgcgctggattgtcgcg
gcagatatcgtggcgcagcaggcgttattacgccaccctgatttcgtcgtcgcgcggatg
aaaggccagtactggcaagtgcgggaaaaagtgttcgattatgaaggccgtttccggcgg
gcacatgaattacggggataa
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