Kosakonia sacchari: C813_24290
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Entry
C813_24290 CDS
T03601
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ksa
Kosakonia sacchari
Brite
KEGG Orthology (KO) [BR:
ksa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ksa03000
]
C813_24290
Transcription factors [BR:
ksa03000
]
Prokaryotic type
Helix-turn-helix
Other families
C813_24290
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
AAA_5
Mg_chelatase
AAA_2
HTH_30
AAA
HTH_28
HTH_1
HTH_7
HTH_psq
HTH_22
HTH_50
HTH_17
HTH_29
AAA_16
HTH_23
Xre-like-HTH
AAA_14
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AIA25034
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Position
complement(2089445..2091199)
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AA seq
584 aa
AA seq
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MPPRALSLAPAGLPCLLENSWQRSLSYGLTRDDDAQPWVATSMLKDARAENGWVNHLAAP
LLARLRPELASHPSIMVLSDATGLVLETHGNRDFLQKAQRYALAPGNLWGEHARGTNAIG
TALALQRHCEVSGGEHYLSRNAGLFCSASPVFRPDGQIAGVLDLSTPAQAPRRDAAALIR
RAVCQIEHEWATSALGADRWLLSLHHDPSVLGSAQELLLIFADQTLLGANKLAMDEFSLT
PQHFGELALQTLFPEASLQVGETTLDASNTRRYYARQTLPARRYIGRGTAFAQDQLTKEK
EKALRIVNAGIALCVTGETGSGKEYLARELYARSQWRTGNFVAINCAALPEHLIESELFG
YVPGAFTGASPKGYIGKCREAHGGVLFLDEIGDMPLALQTRLLRVLQEKKVTPLGANNVY
DVNFTLICATHQDLGARVQAGTFREDLLYRIQEFHLRIPPLREWQNVAGFIQKLWQELGA
ASRGLTLSAEVVATLASRPWPGNVRQLLSQLRVLMALAEDGDCITLADLPAEITTPRQPV
AAVTPKDEQSAIDEAQGNMSLAAKKLGISRSTLYRRLEKRQISS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgccgccacgcgccttgtccctcgctcctgccgggttgccctgcctgcttgaaaactcc
tggcagcgtagtctcagctacgggttgacccgcgatgatgacgcccagccctgggtggcg
acatccatgctgaaagacgcccgtgcggaaaatggttgggtcaaccatctggccgccccg
ctactggcgcggctgcgcccggagcttgccagtcatccgtcgataatggtgctttccgac
gcaaccggtctggtgctggagacccacggcaaccgcgactttctgcaaaaagcgcagcgc
tatgcgctggcacccggcaacctgtggggtgaacacgcgcgcggcaccaacgcgataggc
accgcgctggccttgcagcgccattgtgaagtctccggtggcgaacattatctcagccgc
aacgcaggcttgttttgctcggcgtcccccgttttccgacctgacgggcaaattgctggc
gtattagatctctcgacacccgcccaggcaccgcgccgcgatgccgctgcgctgatccgc
cgcgcggtgtgccaaatagagcatgaatgggccaccagcgcgctcggtgccgaccgctgg
ctgctgagtctacatcatgacccgtctgtgctcggcagtgcgcaagagttgctgctgatt
ttcgccgatcaaaccctgctcggcgcaaacaagctggcgatggatgaattttcgctgacc
ccccagcattttggtgaactcgctttgcaaacgctcttcccggaggccagtttgcaggtt
ggcgaaaccaccctcgacgccagcaatacccggcgctactacgcgcgtcagacgcttcct
gcacggcgctatattgggcgcggcacggcatttgcgcaggatcagctgacgaaggaaaaa
gagaaagcgctgcgcatcgttaatgccgggattgccttgtgtgtgacgggcgaaaccggc
agcgggaaagagtatctggcacgcgagttatatgcccgcagccagtggcgtacaggaaat
ttcgtcgccattaactgtgcggcgctcccggagcatttaattgagtccgaactgtttggc
tatgtccccggcgcgtttaccggcgcaagcccgaaaggctatatcggtaagtgccgggaa
gcccacggcggtgtgctattccttgatgaaatcggcgatatgccgctggcgctgcaaacc
cgcctgctgcgcgtgttgcaggagaaaaaagtgacgccgcttggcgcaaacaatgtgtat
gacgtcaatttcacgctgatttgcgctactcatcaggatctcggtgctcgggtgcaggcc
ggaacattccgcgaagatctgctgtaccgcattcaggagtttcatctgcgcattcccccg
ttgcgcgaatggcagaatgttgctgggtttatccagaaactgtggcaggaactgggtgca
gccagccgtggactcacccttagcgccgaggtggtcgccacgctggcaagtcgcccgtgg
ccgggcaatgtgcgccagttactcagccagttgcgggtattgatggcgctggcggaagac
ggtgattgcattacgcttgcggatttaccggccgagataacaactcctcgtcagcccgtg
gctgcggtcacgccgaaggatgagcagagcgcgattgacgaagcgcagggcaatatgagc
ctggccgcaaaaaaactgggtatctcgcgcagcacactttatcggcggctggagaaaagg
caaatcagcagttaa
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