Kosakonia sacchari: C813_25290
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Entry
C813_25290 CDS
T03601
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ksa
Kosakonia sacchari
Pathway
ksa03030
DNA replication
ksa03430
Mismatch repair
ksa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ksa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C813_25290
03430 Mismatch repair
C813_25290
03440 Homologous recombination
C813_25290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ksa03032
]
C813_25290
03400 DNA repair and recombination proteins [BR:
ksa03400
]
C813_25290
Enzymes [BR:
ksa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C813_25290
DNA replication proteins [BR:
ksa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C813_25290
DNA repair and recombination proteins [BR:
ksa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C813_25290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AIA25159
LinkDB
All DBs
Position
complement(3937171..3940653)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGTAHGA
GMKPIVGADFHVQSDLLGDELTQLTVLAINNTGYQNLTLLISRAYQRGYGALGPWIDRDW
LLELNEGLILLSGGRMGDVGKSVLRGNSALVEQCLEFYKTHFHDRYYLELIRTGRADEES
YLHAAVTLAEEHGLPVVATNDVRFIDAGDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEEEMCELFSDIPEALENTVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVAKSKQGL
EERLAFLFPDENVRAEKRPPYDERLDVELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEAGQHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARREKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRGTFEEGAKKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
ALGDALKAADQHSKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYVGGYRLKDMHPTERGKVTTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctgcgggtgcatagcgactattccatgattgacggg
ctggcgaaaaccgggccgctggtgaaaaaggcggcggcgctcggcatgcctgcgctggcg
atcaccgattttaccaacctgtgtggtctggtgaagttttacggaacggcgcacggtgcc
gggatgaagcctatcgtcggtgctgactttcatgtgcaaagcgatctgcttggtgacgaa
ctgacgcagcttaccgttctcgctatcaacaacaccggttatcaaaacctgacgctgctt
atttcgcgcgcttaccagcgtggttatggcgcgctcggcccgtggattgaccgcgactgg
ctgctggagctcaatgaagggctgattctgctttccggcgggcgcatgggcgacgtgggt
aaaagcgtgctgcgtggcaatagcgcactggtagagcagtgtcttgagttctataaaacc
cattttcacgatcgctactacctggaactgatccgtacggggcgagcggacgaagagtct
tacctgcatgccgccgtcacgctggcagaagagcatggcttgccggtagttgctaccaac
gatgtacggtttattgatgctggcgacttcgacgcccatgagatccgcgtggcgatccac
gacggttttaccctcgacgatcccaaacgcccgcgtaactattcgccgcagcaatacatg
cgcagcgaagaggagatgtgcgagctcttctcggatatccctgaagcgctggagaacacg
gtcgaaatcgccaaacgctgtaacgtcaccgtgcgccttggcgaatacttcctgccgcag
ttcccgacgggtgatatgaccactgaggatttcctcgtagcgaaatccaaacaggggctg
gaagaacgactggcattcctcttcccggatgaaaacgtgcgcgctgaaaagcgcccacct
tacgatgaacgtctcgatgttgaactccaggtaatcaatcagatggggttcccgggctac
ttcctcatcgtgatggaatttatccagtggtcaaaagataacggcgtgccggtagggccg
ggccgtggttccggtgcgggttcgctggtggcttatgcgctgaaaattaccgacctggat
ccgctggaatttgacctgctgtttgaacgtttccttaacccggaacgtgtgtcgatgcct
gacttcgacgtcgatttctgcatggaaaaacgcgaccaggttatcgagcacgtggcggat
atgtacgggcgtgatgcggtatcgcagatcatcacctttggtactatggcggcgaaagcg
gttatccgtgacgttggccgcgtgcttggtcacccgtatggctttgtcgaccgaatttca
aaactggtgccacccgatccggggatgacgctggctaaagcgtttgaagccgaaccgcaa
ctgccggaaatttacgaagctgatgaagaggtcaaagcgctgatcgatatggcgcgcaag
ctggaaggggtgacgcgaaacgccgggaaacacgccggtggtgtggttatcgcgccaacc
aaaatcactgactttgcgccgttatattgtgatgaagccggtcagcacccggttacccag
ttcgataaaaacgatgtggaatatgcgggcctggtgaagtttgacttcctcgggctgcgg
acgctgaccatcattaactgggcgctggagatgattaacgcccggcgcgagaagaacggc
gagccgccgctggatatcgccgctattccgctggatgacaagaaaagtttcgacatgctg
caacgctcggaaaccacggcggttttccagcttgaatcccgcggcatgaaagacctgatc
aaacgcctgcagcctgactgcttcgaagatatgatcgcactggtggcgctgttccgtccg
ggaccgctgcaatcaggcatggtggataacttcatcgaccgtaaacacgggcgtgaagag
atctcttaccctgatgttcaatggcagcatgagagtctgaagccggtgctggagccaacc
tacggcatcattttgtatcaggaacaggtgatgcagattgcgcaggtactttcgggttat
acccttggcggcgcggatatgttgcgccgtgcgatgggtaagaaaaagcccgaagagatg
gccaaacagcgcggaacgtttgaagaaggcgcgaagaaaaacggcgtcgacggcgaactg
gcgatgaaaatcttcgacctggtggaaaaattcgccggttacggatttaacaaatcgcac
tctgccgcctatgctttggtgtcataccagacgctgtggctgaaggcgcactatccagcc
gagtttatggcggcggtaatgaccgccgatatggacaacaccgagaaagtggttggcctg
gtcgatgagtgctggcgcatggggctgaaaattctgccgccggatatcaactcaggtctg
taccatttccacgtcaatgacgatggcgaaattgtttacggcatcggcgcgatcaaaggc
gtgggtgaagggccgatcgaggcgatcattgaagcgcgcaacaacggtggctacttccgc
gaattgtttgatctttgcgcccgtaccgacatcaaaaaactcaatcgtcgggtactggaa
aagctgattatgtcaggggcgtttgatcgcctcggcccgcatcgcgccgcgctaatgaac
gcgctgggcgatgcgctgaaagccgccgatcagcactcgaaagccgaggcgattgggcag
gcagatatgtttggcgtgctggcagaagagccggagcagattgagcagtcctacgccagc
tgccagccgtggccggaacaggtagtgctggacggcgagcgtgaaacgttagggttgtac
ctgacaggtcacccgattaaccagtatttaaaagaaattgagcgctatgtcggaggctac
cggctgaaagacatgcatccgaccgaacgtgggaaagtgaccacggcggcggggctcgtc
attgccgcgcgggttatggtcaccaagcgcggcaatcgtatcggcatctgtaccctggat
gaccgttccgggcgtcttgaagtgatgttgttcactgacgccctggataaataccagcaa
ctgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagt
ggggggcttaaaatgaccgcccgcgaagtgatggacattgacgaagcccgggaaaaatat
gcccgtgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgttcgggaaccattccagtacatctctactatcag
agggcggatgcgcgcgcgcgattacgtttcggcgcaacgtggcgtgtctctccgagcgat
cgtttactcaacgatctgcgtggcctcataggttcggagcaggtggaactggagtttgac
taa
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